Gene PP_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0468 
SymbolrpsH 
ID1044227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp557464 
End bp557856 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content58% 
IMG OID637143854 
Product30S ribosomal protein S8 
Protein accessionNP_742634 
Protein GI26987209 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.37928e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.17372e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTATGC AGGACCCGTT AGCGGACATG CTAACTCGCA TCCGTAATGC CCAGATGGCT 
GAAAAGTCCG TCGTAAGCAT GCCTTCCTCT ACCCTGAAGG TCGCGGTTGC CAAAGTTCTG
AAGGACGAAG GTTACATCGC TGGCTACCAG GTAACTGGTG AGGCCAAGCC TTCCCTGTCG
ATCGAACTGA AGTACTTCGA AGGCCGTCCG GTCATCGAGG AACTGAAGCG CTCCAGCCGT
CCAGGCCTGC GCCAGTACAA GGCCGTCACC GATCTGCCGA AAGTACGTGG CGGTCTGGGC
GTGTCTATCG TCTCCACCAA CAAAGGTGTG ATGACTGATC GCGCTGCGCG CGCTGCCGGT
GTCGGCGGCG AAGTTCTGTG CACAGTGTTC TAA
 
Protein sequence
MSMQDPLADM LTRIRNAQMA EKSVVSMPSS TLKVAVAKVL KDEGYIAGYQ VTGEAKPSLS 
IELKYFEGRP VIEELKRSSR PGLRQYKAVT DLPKVRGGLG VSIVSTNKGV MTDRAARAAG
VGGEVLCTVF