Gene PP_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0449 
SymbolrpsL 
ID1044192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp546170 
End bp546541 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content57% 
IMG OID637143835 
Product30S ribosomal protein S12 
Protein accessionNP_742615 
Protein GI26987190 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.245069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000302311 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTTCGGTCGA GAAGTCCGAC 
GTTCCTGCGC TGCAGAACTG CCCGCAGCGT CGTGGCGTGT GCACCCGTGT GTACACCACC
ACGCCGAAAA AACCTAACTC GGCACTGCGT AAAGTATGCC GTGTGCGTCT GACCAACGGT
TTCGAGGTTT CCTCGTACAT CGGTGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTCGTC
CTGATTCGTG GCGGCCGTGT AAAAGACTTG CCAGGTGTTC GTTACCACAC CGTTCGCGGC
TCTCTGGATA CTTCGGGCGT TAAAGGCCGT AACCAGGGTC GTTCGAAGTA CGGTACCAAG
CGTCCGAAGT AA
 
Protein sequence
MATINQLVRQ PRKRSVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG 
FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKGR NQGRSKYGTK
RPK