| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0437 |
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| Symbol | birA |
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| ID | 1044177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 530085 |
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| End bp | 531044 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637143819 |
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| Product | biotin--protein ligase |
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| Protein accession | NP_742603 |
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| Protein GI | 26987178 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.193351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00820304 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAGT TGTTGAATCT CCTCAAGGAC GGTCGGTTCC ATTCCGGAGA AGCTCTGGGG
GCAGCCCTAG GGGTGAGTCG CAGCGCAGTT TGGAAACAGC TGCAGCATCT GGAAAGTGAG
CTGAACCTCA CCATTCACAA AGTTCGTGGG CGCGGTTACC AGTTGGCCGC GCCACTGGCG
TTGCTTGAGG CGCAGGCAAT CGCCGGATTC GCCGTGGGCG AACAGTGGCC GGTATTCATC
CACGAAACCA TCGATTCGAC CAATGCCGAA GGCTTGCGCC TTGCCAGTGA AGGGCAGGCG
GCTCCATTCC TGGTTCTGGC TGAGCGCCAG AGCGCCGGAC GCGGTCGGCG CGGCCGGCAG
TGGGTCAGCC CATTTGCTGA AAATCTCTAT TACAGCCTGG TCCTGCGCGT CGATGGAGGC
ATGCGTCAGC TCGAGGGGTT GAGCTTGGTA GTGGGGTTGG CGGTAATGCG CACCTTGCAG
GCGTTCGGTG TAAAGGATGT CGGGCTCAAA TGGCCTAACG ATGTGTTGGT ACGTGGGCAG
AAGATCACCG GGATTCTCCT GGAATTGGTA GGCGATCCTG CAGATGTCTG TCATGTGGTG
CTAGGCATTG GTATCAATGT AAACATGCAG GTGAACGAAC AGGTCGATCA GCAGTGGACT
TCTATGCGGC GTGAGGTTGG TGCAGCCATA GATCGCAATC ACTTGGTCGC GCTGCTCAGT
CAGCAGCTAC AGCACGAATT GGCGCGTCAT CGCCGCTACG GCTTTGCCGC ATTCCAGGAG
GAGTGGGAGC AGGCGCACTT GTGGCAGGGG CGCAATGTAT CGCTGGTTGC TGGTAGTACA
CGTATTGATG GCGTGGTTCT TGGCGTCGAC GGGCAGGGTG GTTTGCGCCT TGAGGTGGAC
GGGATGGAAA AGAGCTTCAG TGGTGGTGAG CTCAGTTTGA GGTTGCGTGA TGATTCTTGA
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| Protein sequence | MLKLLNLLKD GRFHSGEALG AALGVSRSAV WKQLQHLESE LNLTIHKVRG RGYQLAAPLA
LLEAQAIAGF AVGEQWPVFI HETIDSTNAE GLRLASEGQA APFLVLAERQ SAGRGRRGRQ
WVSPFAENLY YSLVLRVDGG MRQLEGLSLV VGLAVMRTLQ AFGVKDVGLK WPNDVLVRGQ
KITGILLELV GDPADVCHVV LGIGINVNMQ VNEQVDQQWT SMRREVGAAI DRNHLVALLS
QQLQHELARH RRYGFAAFQE EWEQAHLWQG RNVSLVAGST RIDGVVLGVD GQGGLRLEVD
GMEKSFSGGE LSLRLRDDS
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