| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0436 |
|---|
| Symbol | tyrS |
|---|
| ID | 1044169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 522932 |
|---|
| End bp | 524131 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637143815 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | NP_742602 |
|---|
| Protein GI | 26987177 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00177319 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0465602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGG TTGAAGAGCA GCTGGCGCTT ATCAAGCGCG GTGCGGAAGA AGTACTGGTC
GAGTCGGAAC TGGTGGAGAA GCTCAAGCGC GGCCAACCTC TGCGCATCAA GGCTGGCTTT
GACCCGACCG CACCTGACCT GCACCTGGGT CACACGGTGC TGATCAACAA GCTGCGCCAG
TTCCAGGATC TGGGCCACCA GGTCATCTTC CTGATTGGTG ACTTCACCGG CATGATTGGC
GACCCGAGCG GCAAGAGCGC CACGCGCCCG CCGCTGACCC GCGAGCAGGT GCTGGAGAAC
GCCGAGACGT ACAAGCAGCA GGTTTTCAAG ATTCTTGACC CTGCCAAGAC TGAAGTCGCG
TTCAACTCCA CGTGGATGGA CAAGCTGACC CCTGCCGACT TCATTCGCCT GGCTTCGCAG
TACACCGTCG CGCGCATGCT GGAGCGTGAT GACTTCGACA AGCGTTACAC CACCAACCAG
CCGATTGCCA TTCACGAGTT CCTCTATCCG CTGGTGCAGG GGTACGACTC GGTAGCGCTG
AAGGCGGACG TTGAGCTGGG CGGTACCGAC CAGAAGTTCA ACCTGCTGAT GGGGCGCGAA
CTGCAGCGCT CTTATGGCCA GGAAGCGCAG AACATTGTGA CCATGCCACT GCTCGAAGGG
CTCGACGGCG TGAAGAAGAT GTCGAAGTCG CTGGGCAACT ATGTCGGCAT CCAGGAAGCG
CCAGGGGTGA TGTACAGCAA GCTGGTGTCG ATCCCGGATA CCCTGATGTG GCGTTACTTC
GAGCTGCTGA GCTTCCGTTC GATGGAAGAA ATCGAGCAGT TCCGTGCCGA CGTCGCCAAC
GGTGCCAACC CGCGTGACAT CAAGATCAAG TTGGCAGAAG AGATCGTCGC GCGCTTCCAT
GGAGAAGAGG CTGCGGCCAA TGCTCACCGT GCTGCCGGTA ACCGTATGAA GGAAGGCGAG
CTGCCGGAAG ACTTGCCGGA GATCGAAGTG GCTGCGGCGG AAGACCTGCC AATTGCTGCG
GTGCTGAACC GGGCTGGTCT GGTCAAGAAC TCGGCACAGG CGCGAGACTT GCTGAATAGC
GGCGCGGTGA AAGTTGATGG TGCAGTGGTC GACAAGGACT TCATGTTTGT CCTTGGTGCT
ACCCATGTGT GCCAAGCGGG CAAGAAGTCG TTTGGCCGGG TTACCCTCAA GGCTGAGTGA
|
|---|
| Protein sequence | MKSVEEQLAL IKRGAEEVLV ESELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ
FQDLGHQVIF LIGDFTGMIG DPSGKSATRP PLTREQVLEN AETYKQQVFK ILDPAKTEVA
FNSTWMDKLT PADFIRLASQ YTVARMLERD DFDKRYTTNQ PIAIHEFLYP LVQGYDSVAL
KADVELGGTD QKFNLLMGRE LQRSYGQEAQ NIVTMPLLEG LDGVKKMSKS LGNYVGIQEA
PGVMYSKLVS IPDTLMWRYF ELLSFRSMEE IEQFRADVAN GANPRDIKIK LAEEIVARFH
GEEAAANAHR AAGNRMKEGE LPEDLPEIEV AAAEDLPIAA VLNRAGLVKN SAQARDLLNS
GAVKVDGAVV DKDFMFVLGA THVCQAGKKS FGRVTLKAE
|
|---|
| |