Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0415 |
Symbol | rpe |
ID | 1044137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 503853 |
End bp | 504620 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637143794 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | NP_742581 |
Protein GI | 26987156 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.545723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGTTGGT CGACACCAAT TGATACCAAT CAGCCTTCAT CGCTTTCCCT GAGTTACAAT GCGCGCCACC GTGAATTTGC CAACAGGTGC GCCATGCAGC CCTACGCTAT TGCCCCCTCC ATTCTCTCTG CCGATTTCGC CCGCCTGGGT GAGGACGTCG ACAAGGTATT GGCTGCGGGT GCAGACATCG TCCACTTCGA TGTCATGGAC AATCACTATG TCCCCAACCT GACCATCGGC CCGATGGTTT GCACCGCTCT GCGCAAGTAC GGCGTTACTG CGCCGATCGA CGTGCACCTG ATGGTCAGCC CGGTTGACCG CATCATTGGC GACTTTATCG AAGCGGGTGC CACCTACATC ACCTTCCACC CTGAAGCCAC GCAGCACATC GACCGTTCGC TTCAGCTGAT CAAGGATGGT GGTTGCAAGG CCGGCCTGGT GTTCAACCCG GCCACCAGCC TGGACGCCCT GAAGTACGTG ATGGACAAGA TCGACATGGT GCTGCTGATG AGCGTCAACC CAGGCTTCGG CGGGCAGAAG TTCATCCCCG GCACCCTCGA CAAGCTGCGC GAAGCGCGTG CGCTGATCGA CGCCAGTGGC CGTGATATCC GTCTGGAGAT CGATGGTGGC GTGAACGTCA ACAACATCCG CGAGATCGCT GCGGCTGGCG CCGACACCTT CGTGGCCGGC TCGGCGATCT TCAACGCCCC GGACTATCAG GAAGTGATCG CCAAGATGCG CGCCGAACTG GCCCTGGCCC GCCCATGA
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Protein sequence | MRWSTPIDTN QPSSLSLSYN ARHREFANRC AMQPYAIAPS ILSADFARLG EDVDKVLAAG ADIVHFDVMD NHYVPNLTIG PMVCTALRKY GVTAPIDVHL MVSPVDRIIG DFIEAGATYI TFHPEATQHI DRSLQLIKDG GCKAGLVFNP ATSLDALKYV MDKIDMVLLM SVNPGFGGQK FIPGTLDKLR EARALIDASG RDIRLEIDGG VNVNNIREIA AAGADTFVAG SAIFNAPDYQ EVIAKMRAEL ALARP
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