Gene PP_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0415 
Symbolrpe 
ID1044137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp503853 
End bp504620 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content60% 
IMG OID637143794 
Productribulose-phosphate 3-epimerase 
Protein accessionNP_742581 
Protein GI26987156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.545723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTTGGT CGACACCAAT TGATACCAAT CAGCCTTCAT CGCTTTCCCT GAGTTACAAT 
GCGCGCCACC GTGAATTTGC CAACAGGTGC GCCATGCAGC CCTACGCTAT TGCCCCCTCC
ATTCTCTCTG CCGATTTCGC CCGCCTGGGT GAGGACGTCG ACAAGGTATT GGCTGCGGGT
GCAGACATCG TCCACTTCGA TGTCATGGAC AATCACTATG TCCCCAACCT GACCATCGGC
CCGATGGTTT GCACCGCTCT GCGCAAGTAC GGCGTTACTG CGCCGATCGA CGTGCACCTG
ATGGTCAGCC CGGTTGACCG CATCATTGGC GACTTTATCG AAGCGGGTGC CACCTACATC
ACCTTCCACC CTGAAGCCAC GCAGCACATC GACCGTTCGC TTCAGCTGAT CAAGGATGGT
GGTTGCAAGG CCGGCCTGGT GTTCAACCCG GCCACCAGCC TGGACGCCCT GAAGTACGTG
ATGGACAAGA TCGACATGGT GCTGCTGATG AGCGTCAACC CAGGCTTCGG CGGGCAGAAG
TTCATCCCCG GCACCCTCGA CAAGCTGCGC GAAGCGCGTG CGCTGATCGA CGCCAGTGGC
CGTGATATCC GTCTGGAGAT CGATGGTGGC GTGAACGTCA ACAACATCCG CGAGATCGCT
GCGGCTGGCG CCGACACCTT CGTGGCCGGC TCGGCGATCT TCAACGCCCC GGACTATCAG
GAAGTGATCG CCAAGATGCG CGCCGAACTG GCCCTGGCCC GCCCATGA
 
Protein sequence
MRWSTPIDTN QPSSLSLSYN ARHREFANRC AMQPYAIAPS ILSADFARLG EDVDKVLAAG 
ADIVHFDVMD NHYVPNLTIG PMVCTALRKY GVTAPIDVHL MVSPVDRIIG DFIEAGATYI
TFHPEATQHI DRSLQLIKDG GCKAGLVFNP ATSLDALKYV MDKIDMVLLM SVNPGFGGQK
FIPGTLDKLR EARALIDASG RDIRLEIDGG VNVNNIREIA AAGADTFVAG SAIFNAPDYQ
EVIAKMRAEL ALARP