| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0411 |
|---|
| Symbol | |
|---|
| ID | 1044131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 499450 |
|---|
| End bp | 500574 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637143790 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase |
|---|
| Protein accession | NP_742577 |
|---|
| Protein GI | 26987152 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CGAAGTCGAA CGCTGCAACC GGCGAAACGC TGGTCAGCTT CCGTGGTGTG
CAGAAGAGCT ACGACGGCGA GTCGCTGATC GTCAAAGACC TCAACCTGGA TATCCGCAAG
GGCGAGTTTC TCACCCTGCT TGGCCCGTCC GGCTCGGGCA AGACTACCAG CCTGATGATG
CTGGCGGGCT TCGAGACCCC CACCGCCGGT GAAATCCAGC TTGGCGGGCG CTCGATCAAC
AACGTGCCGC CGCACAAACG TGATATCGGC ATGGTGTTCC AGAACTACGC GCTCTTTCCG
CACATGACCG TGGCCGAGAA CCTGGCCTTT CCGCTGACCG TGCGCAACCT GAGCAAGACC
GACATCAGCG AGCGGGTCAA ACGCGTGCTG AACATGGTGC AGCTCGACGC TTTCGCCAAA
CGCTACCCCG GCCAGCTGTC TGGCGGCCAG CAGCAGCGTG TGGCGCTGGC CCGGGCATTG
GTGTTCGAGC CACAACTGGT ACTGATGGAC GAGCCACTTG GCGCGCTGGA CAAGCAGCTG
CGCGAACACA TGCAGATGGA GATCAAGCAC ATTCACCAGC GCCTGGGTGT GACCGTGGTG
TACGTGACCC ACGACCAGGG CGAAGCGCTG ACCATGTCCG ACCGCGTGGC GGTGTTCCAC
CAGGGCGAAA TCCAGCAGAT CGCCGACCCG CGCACGCTGT ACGAAGAGCC CTGCAACACC
TTCGTCGCCA ACTTCATCGG CGAGAACAAC CGCATCAGCG GCACCCTGCT GGCCAGCGAT
GGCAAACGTT GCCAGGTGCA GTTGCCTCGC GGCGAGCGGG TCGAGGCGCT GGCGGTGAAT
GTCGGCCAGG CCGGCGAGCC GGTGACCCTG TCGATACGCC CGGAGCGCGT GCGCCTGAAC
GGCCACAGTG AAAGCTGCGT CAACCGGTTC TCTGGCCGGG TGGCCGAATT CATTTACCTG
GGCGACCACG TGCGGGTGCG TCTGGAGGTT TGCGGCAAAG GCGACTTCTT CGTGAAGCAG
CCGATTGCCG AGCTCGACCC GGCGTTGGCC GTGGGCGATG TAGTACCGCT GGGCTGGGAG
GTGGAGCACG CCCGCGCGCT CGATCCGATT GCCGAAGCCC ATTGA
|
|---|
| Protein sequence | MSEAKSNAAT GETLVSFRGV QKSYDGESLI VKDLNLDIRK GEFLTLLGPS GSGKTTSLMM
LAGFETPTAG EIQLGGRSIN NVPPHKRDIG MVFQNYALFP HMTVAENLAF PLTVRNLSKT
DISERVKRVL NMVQLDAFAK RYPGQLSGGQ QQRVALARAL VFEPQLVLMD EPLGALDKQL
REHMQMEIKH IHQRLGVTVV YVTHDQGEAL TMSDRVAVFH QGEIQQIADP RTLYEEPCNT
FVANFIGENN RISGTLLASD GKRCQVQLPR GERVEALAVN VGQAGEPVTL SIRPERVRLN
GHSESCVNRF SGRVAEFIYL GDHVRVRLEV CGKGDFFVKQ PIAELDPALA VGDVVPLGWE
VEHARALDPI AEAH
|
|---|
| |