Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0410 |
Symbol | uhpA |
ID | 1044130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 498525 |
End bp | 499154 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637143789 |
Product | LuxR family two component transcriptional regulator |
Protein accession | NP_742576 |
Protein GI | 26987151 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCGAG TACTGGTGGC CGAAGACCAC ACCATTGTCC GTGAAGGCAT CAAGCAGTTG ATTGGCCTGG CCAAGGACAT GCAAGTGGCG GGGGAGGCCG GTAATGGCGA GCAGTTGCTC GAAACCCTGC GCCACACACC GTGCGAGGTG GTACTGCTGG ACATCTCGAT GCCGGGTGTG AACGGCCTGG AGGCGATCCC GCGTATCCGT GCGCTGCACG ATGCTCCAGC GATCCTGATG TTGTCGATGC ACGATGAGGC ACAGATGGCG GCGCGGGCGC TGAAGGCCGG TGCGGCGGGC TATGCCACCA AAGACAGTGA TCCGGCGTTG TTGTTGACAG CGATTCGTCG GGTGGCCGGT GGCGGGCGTT ATATTGACCC GTCGCTGGCC GACCGCATGG TGTTCGAAGT AGGCCTCACC GAATCCCGGC CGTTGCACAC ACTGCTCTCG GAGCGGGAAT TTTCGGTGTT CGAGCGCCTG GCCCAGGGCG CCAACGTCAA CGACATCGCC CAGCAGTTGG CGCTGTCGAG CAAGACCATC AGCACCCACA AGGCACGCCT GATGCAGAAG TTGAAAGTGA ACTCGCTGGC GGAGCTGGTG AAGTACGCCA TGGAGCACAA GCTGATCTGA
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Protein sequence | MIRVLVAEDH TIVREGIKQL IGLAKDMQVA GEAGNGEQLL ETLRHTPCEV VLLDISMPGV NGLEAIPRIR ALHDAPAILM LSMHDEAQMA ARALKAGAAG YATKDSDPAL LLTAIRRVAG GGRYIDPSLA DRMVFEVGLT ESRPLHTLLS EREFSVFERL AQGANVNDIA QQLALSSKTI STHKARLMQK LKVNSLAELV KYAMEHKLI
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