Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0402 |
Symbol | pdxA |
ID | 1044116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 487311 |
End bp | 488300 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637143782 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | NP_742569 |
Protein GI | 26987144 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.233027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCCC TGCGCTTCGC CGTCACCCCC GGCGAGCCGG CCGGCATAGG CCCCGACCTG TGCCTGCTGC TCGCCGCAGA CGCCCAGCCC CACCCCCTGA TCGCCATCAC CAGCCGTGAC CTGCTCGCCG AGCGGGCCAC GCAGCTGGGG CTGGCCGTCA GCCTGCTGCC GGTAGCCCCG GGCCAATGGC CTGACCTCCC GGCACCCGCA GGTAGCCTGT ACGTCTGGGA TACCCCCTTG GCGGCCCCGG TGGTGCCAGG CCAGCTCGAC AAGGCCAACG CAGCGTTCGT GCTGGAAACC CTGACCCGCG CCGGGCAAGG CTGCCTGGAC GGGCACTTCG CCGGGATGAT CACGGCCCCG GTGCACAAGG GTGTGATCAA CGAAAGCGGT ATCGCCTTTT CCGGGCATAC CGAATTCCTT GCCGAACTGA CCCGCACCGC ACAAGTGGTA ATGATGCTGG CCACCCGCGG CCTGCGCGTG GCCCTGGTGA CCACGCACCT GCCACTGCGT GATGTTGCCG ACGCTATCAC TGCAGAGCGC GTCGAACGTG TAACCCGTAT CCTGCATGCC GACATGCGCG ACAAGTTTGG CATTGCCAAC CCGCGTATCC TCGTGTGCGG CCTCAACCCG CATGCGGGCG AGGGCGGCCA CCTGGGCCGC GAAGAAATCG ACATCATCGA GCCGACCCTG GCCCGCCTGC GCACCGAAGG CATGGACCTG CGCGGGCCGC TGCCGGCCGA TACCCTGTTT ACCCCCAAAT ATCTGGAGCA CTGCGATGCG GTGCTGGCGA TGTACCACGA CCAGGGCCTT CCCGTACTCA AGTACAAAGG CTTCGGCGCA GCAGTGAACG TGACCCTGGG CCTGCCGATC ATCCGCACGT CGGTTGACCA CGGCACCGCC CTGGACCTGG CCGGCACTGG CAAAGTCGAC ACCGGCAGCC TGCGCGTCGC ACTGGAAACC GCCTACCAGA TGGCCGAGAA CCGACCATGA
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Protein sequence | MKPLRFAVTP GEPAGIGPDL CLLLAADAQP HPLIAITSRD LLAERATQLG LAVSLLPVAP GQWPDLPAPA GSLYVWDTPL AAPVVPGQLD KANAAFVLET LTRAGQGCLD GHFAGMITAP VHKGVINESG IAFSGHTEFL AELTRTAQVV MMLATRGLRV ALVTTHLPLR DVADAITAER VERVTRILHA DMRDKFGIAN PRILVCGLNP HAGEGGHLGR EEIDIIEPTL ARLRTEGMDL RGPLPADTLF TPKYLEHCDA VLAMYHDQGL PVLKYKGFGA AVNVTLGLPI IRTSVDHGTA LDLAGTGKVD TGSLRVALET AYQMAENRP
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