Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0395 |
Symbol | |
ID | 1044108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 479523 |
End bp | 481091 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637143775 |
Product | SpoVR family protein |
Protein accession | NP_742562 |
Protein GI | 26987137 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.466906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA GAGCACAGAG ACGCCAACCC ATTTCCACTG GGTCCGAGTG GACGTTCGAG CTGATCCAGA CCTACGACCG GGAAATCAGC CGCTTGGCCG AGCGTTACGC CCTGGACACC TACCCCAACC AGATCGAGGT CATCACTGCC GAACAGATGA TGGACGCCTA CGCCTCGGTC GGCATGCCGC TGGGCTACCA CCACTGGTCC TACGGCAAGC AGTTCCTCAG TACGGAAAAG TCCTACAGCC GCGGCCAGAT GGGCCTGGCC TACGAGATCG TGATCAACTC CGACCCTTGT ATCGCCTACC TGATGGAAGA AAACACCATG TGCATGCAGG CACTGGTGAT TGCGCACGCC TGCTACGGCC ATAACAGTTT TTTCAAAGGC AATTACCTGT TCCGTACCTG GACTGACGCC AGTTCGATCA TCGACTACCT GGTGTTCGCC AAGCAGTACA TCGCCCAGTG CGAAGAGCGC CACGGCATCG ATGCTGTGGA GGACTTGATC GACTCCTGCC ATGCCCTGAT GAACTACGGT GTCGACCGCT ACAAGCGGCC TTACCCTATT TCTGCGGAAG AAGAGCGGCG CCGGCAACAG GAGCGCGAAG AGCATCTTCA GCGTCAGATC AACGACCTTT GGCGGACAAT TCCGAAAAAC GCCGAAAAGG GTAACGACCG CGATGAGGGG CGCTTCCCCG CCGAACCGCA GGAAAACATC CTGTATTTCA TCGAGAAGAA CGCCCCACTG CTCGAACCCT GGCAGCGTGA AGTAGTGCGC ATCGTGCGCA AGATCGCCCA GTACTTCTAC CCGCAGCGCC AGACCCAGGT CATGAACGAG GGTTGGGCAA CCTTCTGGCA CTACACCCTG ATGAACGACC TGTACGACGA AGGGCTGATT ACCGAAGGCT TCATGATGGA GTTCTTGCAG TCGCACACCA GCGTGGTGTT CCAGCCCGGC TTCGACAGCC CGTACTACAG CGGCATCAAC CCCTACGCAC TGGGCTTTGC GATGTACACC GACATCCGCC GCATGTGCGA AAACCCCACC GAGGAAGATC GCCACTGGTT CCCCGAAATT GCCGGCAGCG ACTGGCTTTC TACCATCAAG TTCGCCATGA GCAGCTTCAA GGACGAGAGC TTCATCCTGC AGTACCTGTC GCCCAAGGTG ATGCGCGACC TCAAGCTGTT CAGCATCCTC GATGACGACC AGCGCGACGA CCTGCTGGTG CCCGCCATCC ATGATGAGGC CGGCTACCGG GTGATTCGGG AGCAGCTGGC AGCGCAGTAC AACCTGGGCA ACCGTGAACC GAACGTTCAG ATCTGGAGCG TCGACCGCCG CGGAGACCGC TCGCTGACCC TGCGACACCA GCAACACAAC CGCAAACCGC TGGGCGACTC GACCGACGAA GTGCTAAAGC ACCTGCATCG CCTGTGGGGC TTCGATATCC ACCTGGAGAC CGTGCAAGGC GAGCAAGTGA TGAGTACTCA CCACATGCCG CCGCGCGGCG AGCATAGCGA AAGCGCCGAC TATGGCCGCA TGGACCTGGC TGTTATCCAC CACCTCTGA
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Protein sequence | MTARAQRRQP ISTGSEWTFE LIQTYDREIS RLAERYALDT YPNQIEVITA EQMMDAYASV GMPLGYHHWS YGKQFLSTEK SYSRGQMGLA YEIVINSDPC IAYLMEENTM CMQALVIAHA CYGHNSFFKG NYLFRTWTDA SSIIDYLVFA KQYIAQCEER HGIDAVEDLI DSCHALMNYG VDRYKRPYPI SAEEERRRQQ EREEHLQRQI NDLWRTIPKN AEKGNDRDEG RFPAEPQENI LYFIEKNAPL LEPWQREVVR IVRKIAQYFY PQRQTQVMNE GWATFWHYTL MNDLYDEGLI TEGFMMEFLQ SHTSVVFQPG FDSPYYSGIN PYALGFAMYT DIRRMCENPT EEDRHWFPEI AGSDWLSTIK FAMSSFKDES FILQYLSPKV MRDLKLFSIL DDDQRDDLLV PAIHDEAGYR VIREQLAAQY NLGNREPNVQ IWSVDRRGDR SLTLRHQQHN RKPLGDSTDE VLKHLHRLWG FDIHLETVQG EQVMSTHHMP PRGEHSESAD YGRMDLAVIH HL
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