| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0366 |
|---|
| Symbol | bioD |
|---|
| ID | 1044073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 443837 |
|---|
| End bp | 444517 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637143745 |
|---|
| Product | dithiobiotin synthetase |
|---|
| Protein accession | NP_742533 |
|---|
| Protein GI | 26987108 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0132] Dethiobiotin synthetase |
|---|
| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.55843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG CCTTTTTCAT TGCGGGTACC GATACCGATG TCGGCAAGAC CACCATCGCC
GCTGGCCTGT TGCATGCGGC GCGTTTGCAG GGCATGAGCA CGCTGGGTGC CAAGCCGGTT
GCCTCGGGCT GCACCATGAC GCCGAAAGGC CTGCGCAATA GCGATGCCCT GGCGCTGATC
GACGAAAGCA CGGTCAAGCT GCCTTATGAG CAGGTCAATC CGTTTGCCTT CGAGCCTGCT
ATAGCCCCGC ATGTGGCGGC GCGCGAGGCA GGGGTGACGC TGGCTGTGCC AGAACTGCTC
GCGGCGATGC GCAATGTGCT GCAACAAAAT GCCGACTTCA CCTTGATAGA GGGGGCCGGT
GGCTGGCGCG TACCGCTGTC GGGCCTGGAG AACCTGTCCG ACCTTGCCGT TGCCCTGCGA
TTGCGGGTGA TTCTGGTGGT AGGCGTGCGG TTGGGTTGCA TCAGCCATGC CTTGCTCAGC
GCCGAAGCGA TCGAGCGTGA TGGGCTGCAG TTGGCGGGTT GGGTAGCAAA CATCATCGAG
CCGCGCACCT CACGCCTGGA AGAGAACCTG GCCAGCCTTG CAGAGCGCCT GCCGGCGCCT
TGCCTGGGGC GGGTTCCCAA GCTCAAGCAG GCCAGTGCCG ACATGGTGGC TGAGCATCTG
CAACTGGATC TGCTGGATTA G
|
|---|
| Protein sequence | MSQAFFIAGT DTDVGKTTIA AGLLHAARLQ GMSTLGAKPV ASGCTMTPKG LRNSDALALI
DESTVKLPYE QVNPFAFEPA IAPHVAAREA GVTLAVPELL AAMRNVLQQN ADFTLIEGAG
GWRVPLSGLE NLSDLAVALR LRVILVVGVR LGCISHALLS AEAIERDGLQ LAGWVANIIE
PRTSRLEENL ASLAERLPAP CLGRVPKLKQ ASADMVAEHL QLDLLD
|
|---|
| |