Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0361 |
Symbol | |
ID | 1044068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 439238 |
End bp | 439969 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143740 |
Product | competence protein ComF, putative |
Protein accession | NP_742528 |
Protein GI | 26987103 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGTC AACTGCACTG GAAGCGACTG GTTTACAAGT GCTCACTTAT TAATCAGATG TGCTTGTTAT GCGATGAGCC TGCCGAGCAG CATTACCCGC TGTGCATCAC CTGCGAACAG GCGCTGCCCT GGCTGGGTGA TCAGTGCCGA CATTGCGCCC TGCCCTTGCC CATGGCCGGC TTGACCTGCG CCCCGTGTGG CCGCTGCTTG CCGGCCTTCG ATCAGGTCAT TGCCCTGTGG CATTTCGGCT TTCCGGTGGA CACGTTGATC AGCCGTTTCA AGCACAATCG CCAATGGCCT TTGGGGCGCC TGATGGCTGA GCTGCTGGGG CAGGGGCTGC AGTATCGCTA TGCCGAAGGG TTGCCTCGCC CTGACCTGCT GTTGCCTGTG CCTCTGGCCA GGCGTCGACT GCGCGAGCGG GGGTTCAACC AGGCGGGGAT GCTTGGGCGG TGGTTGTCGT CGCACGTCGG GGTAACCTGC AACGAGCGTT TGCTGGCCCG CACCCGCGAG ACACCGGCAC AGCAACATCT GGGCGCCAAG GCACGGCGGC GCAATTTGCG CCAGGCGTTC GCGGTACAGG GCGAACTGGA AGGCAAGCAT GTCGCCATCG TCGATGATGT GTTGACCACC GGTGCCACTG CGCAGGCTAT CGCCCAGGCA CTGCGCAAGG CAGGTGCGCG GCGGGTGGAT GTGTATTGCC TGGCACGTAC GCCCAAACCG GGGTATGTAT GA
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Protein sequence | MNCQLHWKRL VYKCSLINQM CLLCDEPAEQ HYPLCITCEQ ALPWLGDQCR HCALPLPMAG LTCAPCGRCL PAFDQVIALW HFGFPVDTLI SRFKHNRQWP LGRLMAELLG QGLQYRYAEG LPRPDLLLPV PLARRRLRER GFNQAGMLGR WLSSHVGVTC NERLLARTRE TPAQQHLGAK ARRRNLRQAF AVQGELEGKH VAIVDDVLTT GATAQAIAQA LRKAGARRVD VYCLARTPKP GYV
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