| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0358 |
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| Symbol | rarD-1 |
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| ID | 1044065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 436399 |
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| End bp | 437286 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143737 |
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| Product | RarD protein, DMT superfamily transporter |
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| Protein accession | NP_742525 |
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| Protein GI | 26987100 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000108784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.875961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCG CAAACCCGCG TCGCGGGTAC ATACTGGGCT TGAGCGCCTA CATCATCTGG
GGCCTTTTCC CCCTCTACTT CAAGGCAATC CAGAGCGTCC CGGCGGTGGA GATCATTGTC
CACCGGGTGC TCTGGTCAGC ACTGTTCGGC TCGCTGCTGC TACTGGTGTG GAAACACCCC
GGCTGGTGGC GTGAACTGCG CAACAACCCG CGCCGGCTGG GCATCCTGGC ACTGAGCGGG
GCACTGATCG CCGGCAACTG GCTGACCTAC GTGTGGTCGG TGAACAACGG CCGTATGCTC
GAGGCCAGCC TGGGCTATTA CATCAACCCG CTGATCAATG TACTGCTGGG CATGCTGATT
CTTGGTGAGC GCCTGCGCCG CCTGCAATGG CTGGCGGTGG GCATGGCTGC CGTGGGTGTG
GCGCAGCAGG TGTGGCAAGT GGGCAGCCTG CCGTGGGTAT CACTGGTGCT GGCGTTGAGC
TTCGGCTTCT ATGGGCTGAT CCGTAAGCAG GCGCCGGTGG CTGCGCTGCC CGGCCTGGTG
GTGGAAACCT GGATGCTGGT ACCGCTGGCC CTTGGCTGGC TGCTACTGCA CCCGACAGCG
ATGAGTGCCC AGGGCGCGTT CTATACCAGC AGCGAGGCGC TGTGGCTGAT GGCGGCCGGG
CCGGTGACGC TGGTGCCGCT GGTATGCTTC AACGCCGCCG CACGGCACCT GCCGTACACC
ACGCTGGGCT TCCTGCAGTA CCTGGCGCCG ACCTTGGTGC TGTTGCAGGC CGTAGTGCTG
TTCGACGAGC ATTTGTCGTC GAGCACCCTG GCGGCCTTCA TGTTCATCTG GGCAGGTTTG
GCGATTTACA GCGTCGATGC ATGGCTGAAC TTGCGCAAAC GTAGCTGA
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| Protein sequence | MHAANPRRGY ILGLSAYIIW GLFPLYFKAI QSVPAVEIIV HRVLWSALFG SLLLLVWKHP
GWWRELRNNP RRLGILALSG ALIAGNWLTY VWSVNNGRML EASLGYYINP LINVLLGMLI
LGERLRRLQW LAVGMAAVGV AQQVWQVGSL PWVSLVLALS FGFYGLIRKQ APVAALPGLV
VETWMLVPLA LGWLLLHPTA MSAQGAFYTS SEALWLMAAG PVTLVPLVCF NAAARHLPYT
TLGFLQYLAP TLVLLQAVVL FDEHLSSSTL AAFMFIWAGL AIYSVDAWLN LRKRS
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