Gene PP_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0320 
Symbol 
ID1044017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp383521 
End bp385458 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content64% 
IMG OID637143699 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionNP_742487 
Protein GI26987062 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.09011e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTATCT GGCGTAAGAG CATCCAGTTG CAATTGATCA CCAGCATGGG CGCTGCCCTG 
CTGGCGAGCA TCCTGGTGGT GGTCATTATC TTCACTGTGG CGCTGAACCG CCTCACCGAC
CGCTACCTGG TCGACACTGC CCTGCCAGCC AGCATCGAGG CTATCCGCAA TGACATCGAG
CGCATGCTGG GCCAACCGTT GGTTGCTGCC GCGGACATTG CCGGTAACAC CCTGCTGCGC
GACTGGCTTG CTGCCGGTGA AGATCCCGCG CAGGCACCCC AATTCATCGA ATACCTGACC
GCCGCCAAAC AGCGCAACCA CGCCTTTACT ACGCTGTTCG CCTCGACCGA AACCGGCCAT
TACTACAACG AGAACGGCCT GGACCGCACC CTCAGCCGCA GCAACCCCAA GGACAAGTGG
TTTTACGGTT ACATCGACAG CGGCGCCGAA CGGTTCATCA ACATCGACAT CGATGGTGCC
ACCGGCGAAC TGGCTCTGTT CATCGACTAT CGCGTGGAAA AGGAAGGCAA GCTGGTGGGT
GTGGCCGGCA TGGGCCTGCG CATGACCGAG TTATCGAAGC TGATCCACGA CTTCAGCTTT
GGCGAGCACG GCAAGGTGTT CCTGGTGCGC AACGATGGCC TGATCCAGGT GCATCCCGAT
GCTGCCTTCA GTGGCAAGCG CCAGCTTGCC GAGCAGCTTG GCGCGGACGC GGCCAAAGGC
GTCATGACCG GAGGCGAGAG CCTGCGTAGC AGCCGCTTCA GCCGTGACGG TGAGCGCTAC
CTGGCGCTGG GCCTGCCGCT GCGCGACCTC AACTGGACCC TTGTGGCCGA AGTGCCAGAG
TCGGAAATTT ACGCGCAAAT GCATCAGGCC GTCTGGCTGA CCAGCCTGAT CGGTGGCGCC
GTCGCGTTGG TGTCGCTGCT GTTGGTGGTA CTGCTGGCGC GTGGCCTGGT GCGGCCGATC
CGCCGCGTTA CCGCCGCATT GGTTCAGATT GGCAGTGGAG CGGGTGATCT CAGCCACCGC
CTGGACGATT CGCGTCAGGA TGAGCTGGGT GACCTGGCCC GTGGTTTCAA CCGCTTCCTG
GACAGCCAAC GCAGCCTGAT CGGCGAGGTG TTGAGTACCT CCGAGCGGCT GCGACGGGCC
GTGGAGCAGG TAACCCAGGT GGTGGACAAC ACCGCCGAGC GCTCCGGGCG CCAGCAGGAG
ATGACCGAAA TGGTCGCCAC TGCTGTACAC GAGATGGGCC TGACCGTGCA GGACATCGCC
CGCAATGCCG GCGATGCGGC CCAGGCGTCG CAGTCGGCAC GAGACGAGGC GTTGCAGGCC
CGCGAGGTGG TGCAACGATC CATTCGTGGC ATCGAGGGCA TGTCGGGCGA CATCGGCAAG
GCGGCCGATG CGGTCAGCCA GCTGGCCGAC GAAGTCGCCT CGGTCGATGA AGTGCTCGCG
GTAATCCGCA GCATTTCCGA GCAGACCAAC CTGCTCGCGT TGAACGCTGC CATCGAGGCC
GCGCGGGCAG GGGAGATGGG GCGCGGGTTC GCTGTGGTGG CCGATGAAGT ACGTACGTTG
GCCCGGCGCA CACAGCTGTC CACCGATGAA GTGCAGCAGA TGATCCAGCG CCTGAAGCTA
GGTGCAGGTT CGGCGGTGAG TTCAATGCAG GCAGGGCAGC AGGCGACCGG CAGTGGCGTG
GAATCGAGCC AGCGCACCGG GGCATCGCTA AGCGCGATTA CCGACCAGGT AGAGCACATC
AGCGACATGA ACCATCAGGT GGCCACGGCT ACCGAGGAGC AGTCGGCGGT GACCGAGGAA
ATCAACCGGA CGGTGCAGGG GATTTCCGAT TTGGCGCGTG AGACGGCGGC GGAGGTGCAA
GGGTGCCGCG AGGAGTGCCA GGCGTTGCGT GGGTTGGCTG ATGACCTGGC GCGGCAGATG
GGTGGGTTCA GGCTCTAG
 
Protein sequence
MRIWRKSIQL QLITSMGAAL LASILVVVII FTVALNRLTD RYLVDTALPA SIEAIRNDIE 
RMLGQPLVAA ADIAGNTLLR DWLAAGEDPA QAPQFIEYLT AAKQRNHAFT TLFASTETGH
YYNENGLDRT LSRSNPKDKW FYGYIDSGAE RFINIDIDGA TGELALFIDY RVEKEGKLVG
VAGMGLRMTE LSKLIHDFSF GEHGKVFLVR NDGLIQVHPD AAFSGKRQLA EQLGADAAKG
VMTGGESLRS SRFSRDGERY LALGLPLRDL NWTLVAEVPE SEIYAQMHQA VWLTSLIGGA
VALVSLLLVV LLARGLVRPI RRVTAALVQI GSGAGDLSHR LDDSRQDELG DLARGFNRFL
DSQRSLIGEV LSTSERLRRA VEQVTQVVDN TAERSGRQQE MTEMVATAVH EMGLTVQDIA
RNAGDAAQAS QSARDEALQA REVVQRSIRG IEGMSGDIGK AADAVSQLAD EVASVDEVLA
VIRSISEQTN LLALNAAIEA ARAGEMGRGF AVVADEVRTL ARRTQLSTDE VQQMIQRLKL
GAGSAVSSMQ AGQQATGSGV ESSQRTGASL SAITDQVEHI SDMNHQVATA TEEQSAVTEE
INRTVQGISD LARETAAEVQ GCREECQALR GLADDLARQM GGFRL