Gene PP_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0316 
Symbol 
ID1044011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp379702 
End bp380808 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content61% 
IMG OID637143695 
Productoxidoreductase FAD-binding domain protein 
Protein accessionNP_742483 
Protein GI26987058 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.482566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.417e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACATGT CCGATACCTT CCTCAATCCG GTCACTACCC AGACCTGGGC CAATGGCCGC 
CACATTGTGC GCTGCGTCAA GGTCATCCAG GAGACCTGGG ACGTGCGCAC CTTCTGCTTC
ATGGCCGACC AGCCGATCAT GTTCTTCTTC AAGCCAGGGC AGTTCGTTAC CCTGGAGCTG
GAGATCGAAG GCAAGCCCGT GATGCGGTCC TACACCATCT CCAGTTCGCC GTCAGTGCCC
TACAGCTTCT CGATCACCGT CAAGCGCGTG CCGGGTGGCC TGGTGTCGAA CTTCCTGCAT
GACACCATGC ACGAAGGCGC CGAGCTGCCG GTGCACGGCC CGGTGGGGCT GTTCAACGCC
ATCGACTTCC CTGCTGGCAA GGTGCTGTAC CTGTCGGGCG GCGTCGGTAT TACCCCAGTG
ATGTCGATGG CGCGCTGGTT CTACGACACC AATGCCAACG TCGACATGGT GTTCGTCCAC
AGCGCCCGTT CGCCGAAAGA CATCATCTAC CACCGCGAGC TGGAACAGAT GGCGTCGCGC
ATCCCCAACT TCAGCCTGCA CATCATTTGC GAGAAGCACG GGCTGGGTGA GCCGTGGGCG
GGTTACCGCG GTTACCTGAA CCAGCGGCTA ATGGAGTTGA TTGCGCCCGA CTACATGGAG
CGCGTTGTGT TCTGCTGCGG CCCGACGCCG TACATGACGG CGGTCAAGCG CATGCTTGAA
GCGGTCGGCT TCGACATGAA GAATTATCAC GAAGAGTCGT TCGGTGCCAC GCCGCCAGAA
GCCAAGGCTG ATGCGGTGGA GCACGCCGAG CAGGCAGCCG ATGCGCCTGA GCTGGATGTT
TCCGACCTCA ACCTGGTGGA GTTCATCGGC AGCGAGAAGA GCATCCGCAT CGCCCCGGGC
GAGACCGTGC ATGCGGCGGC AGCCAAGGTT GGCCTGATGA TCCCGAAAGC CTGCGGCATG
GGTATCTGCG GCACCTGCAA GGTGCTCAAA CTGGGCGGCG AGGTGGAAAT GGAGCACAAC
GGCGGGATTA CCGAAGAGGA CGAAGCCGAG GGCTACATCC TGTCGTGCTG CAGCGTGCCG
AAAGGGGATG TGCGGATCGA TTACTGA
 
Protein sequence
MNMSDTFLNP VTTQTWANGR HIVRCVKVIQ ETWDVRTFCF MADQPIMFFF KPGQFVTLEL 
EIEGKPVMRS YTISSSPSVP YSFSITVKRV PGGLVSNFLH DTMHEGAELP VHGPVGLFNA
IDFPAGKVLY LSGGVGITPV MSMARWFYDT NANVDMVFVH SARSPKDIIY HRELEQMASR
IPNFSLHIIC EKHGLGEPWA GYRGYLNQRL MELIAPDYME RVVFCCGPTP YMTAVKRMLE
AVGFDMKNYH EESFGATPPE AKADAVEHAE QAADAPELDV SDLNLVEFIG SEKSIRIAPG
ETVHAAAAKV GLMIPKACGM GICGTCKVLK LGGEVEMEHN GGITEEDEAE GYILSCCSVP
KGDVRIDY