Gene PP_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0304 
Symbol 
ID1043995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp364655 
End bp365623 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID637143683 
Producthypothetical protein 
Protein accessionNP_742471 
Protein GI26987046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00268504 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACTGCC GATGGAGAGC CACCATGCAC AGCTTGATCC GCCGCAGCCT GTTGCCCCTT 
GCCCTGAGCA GCATCGTCGC CACCCCGCTT TTCGCCGCCG AGCCCGCCGC CTGCAAAAAC
GTGCGCCTGG GCGTGGTCAA CTGGACCGAC GTCATTGCCA CCAGCGCCAT GGCCCAGGTA
CTGCTCGACG GCCTGGGGTA CCAGACCAAA CAGACCAGTG CCTCGCAACA GATCATCTTC
GCCGGCATCC GCGACAAACG CCTGGACATG TTCCTGGGTT ACTGGAACCC GATCATGACC
CAGACCATTA CCCCGTTCGT CGATGCCAAC CAGTTCAAGG TGCTGGACAA GCCAAGCCTG
GAGGACGCGC GCGCCACCTT GGCCGTGCCG AAATACCTCT ACGACAAGGG CCTGAAGACT
TTCGCCGACA TCCACAAGTT CGAGAAAGAG CTGGGCGGCA AGATCTATGG CATCGAACCG
GGTTCCGGCG CCAACACCCA GATCAAGGCA ATGATCACCA AGAACCAGTT CGACCTGGGC
AAGTTCCAGC TGGTCGAGTC CAGCGAGGCC GGCATGCTCG CCGCCGTCGA CCGCGCCGTG
CGGCGCAAGG AGGCCGTGGT GTTCTTCGGC TGGGCGCCAC ACCCGATGAA CGTGAACATC
GACATGGCCT ACCTGGGTGA CAGCCAGGAT GCACTCGGCC CTGACGAAGG CCGCGCGACG
GTGTGGACGG TGACGGCTCC GGACTATGCC GAACGCTGCC CCAATGCCCT CCGCCTGCTG
GCCAACCTGA AGTTCAGCGC CGAGGACGAG AGCCGCATGA TGCAGCCACT GCTCGACCAC
AAGGACGCGC TGGAATCAGC CCGCCAGTGG CTCAAGGACC ACCCCGAGGA CAAGGCCCGC
TGGCTTGAGG GTGTGACCAC CTTCGATGGC AAGCCGGCTG CGGACAACCT CAAGCTTACC
GCCAACTGA
 
Protein sequence
MHCRWRATMH SLIRRSLLPL ALSSIVATPL FAAEPAACKN VRLGVVNWTD VIATSAMAQV 
LLDGLGYQTK QTSASQQIIF AGIRDKRLDM FLGYWNPIMT QTITPFVDAN QFKVLDKPSL
EDARATLAVP KYLYDKGLKT FADIHKFEKE LGGKIYGIEP GSGANTQIKA MITKNQFDLG
KFQLVESSEA GMLAAVDRAV RRKEAVVFFG WAPHPMNVNI DMAYLGDSQD ALGPDEGRAT
VWTVTAPDYA ERCPNALRLL ANLKFSAEDE SRMMQPLLDH KDALESARQW LKDHPEDKAR
WLEGVTTFDG KPAADNLKLT AN