Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0304 |
Symbol | |
ID | 1043995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 364655 |
End bp | 365623 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143683 |
Product | hypothetical protein |
Protein accession | NP_742471 |
Protein GI | 26987046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00268504 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACTGCC GATGGAGAGC CACCATGCAC AGCTTGATCC GCCGCAGCCT GTTGCCCCTT GCCCTGAGCA GCATCGTCGC CACCCCGCTT TTCGCCGCCG AGCCCGCCGC CTGCAAAAAC GTGCGCCTGG GCGTGGTCAA CTGGACCGAC GTCATTGCCA CCAGCGCCAT GGCCCAGGTA CTGCTCGACG GCCTGGGGTA CCAGACCAAA CAGACCAGTG CCTCGCAACA GATCATCTTC GCCGGCATCC GCGACAAACG CCTGGACATG TTCCTGGGTT ACTGGAACCC GATCATGACC CAGACCATTA CCCCGTTCGT CGATGCCAAC CAGTTCAAGG TGCTGGACAA GCCAAGCCTG GAGGACGCGC GCGCCACCTT GGCCGTGCCG AAATACCTCT ACGACAAGGG CCTGAAGACT TTCGCCGACA TCCACAAGTT CGAGAAAGAG CTGGGCGGCA AGATCTATGG CATCGAACCG GGTTCCGGCG CCAACACCCA GATCAAGGCA ATGATCACCA AGAACCAGTT CGACCTGGGC AAGTTCCAGC TGGTCGAGTC CAGCGAGGCC GGCATGCTCG CCGCCGTCGA CCGCGCCGTG CGGCGCAAGG AGGCCGTGGT GTTCTTCGGC TGGGCGCCAC ACCCGATGAA CGTGAACATC GACATGGCCT ACCTGGGTGA CAGCCAGGAT GCACTCGGCC CTGACGAAGG CCGCGCGACG GTGTGGACGG TGACGGCTCC GGACTATGCC GAACGCTGCC CCAATGCCCT CCGCCTGCTG GCCAACCTGA AGTTCAGCGC CGAGGACGAG AGCCGCATGA TGCAGCCACT GCTCGACCAC AAGGACGCGC TGGAATCAGC CCGCCAGTGG CTCAAGGACC ACCCCGAGGA CAAGGCCCGC TGGCTTGAGG GTGTGACCAC CTTCGATGGC AAGCCGGCTG CGGACAACCT CAAGCTTACC GCCAACTGA
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Protein sequence | MHCRWRATMH SLIRRSLLPL ALSSIVATPL FAAEPAACKN VRLGVVNWTD VIATSAMAQV LLDGLGYQTK QTSASQQIIF AGIRDKRLDM FLGYWNPIMT QTITPFVDAN QFKVLDKPSL EDARATLAVP KYLYDKGLKT FADIHKFEKE LGGKIYGIEP GSGANTQIKA MITKNQFDLG KFQLVESSEA GMLAAVDRAV RRKEAVVFFG WAPHPMNVNI DMAYLGDSQD ALGPDEGRAT VWTVTAPDYA ERCPNALRLL ANLKFSAEDE SRMMQPLLDH KDALESARQW LKDHPEDKAR WLEGVTTFDG KPAADNLKLT AN
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