| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0296 |
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| Symbol | |
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| ID | 1043984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 355254 |
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| End bp | 356201 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637143675 |
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| Product | glycine betaine/L-proline ABC transporter, periplasmic binding protein |
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| Protein accession | NP_742463 |
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| Protein GI | 26987038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000206195 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGGTT CACCCTCGCT GTTACTGGTT GCGTTGCTGT CCGCGCCATT GCTGGCCCAA
GCAGCCGAAC CCGAGCAATG TCAGACTGTA CGCTTCTCCG ATGTCGGCTG GACCGACATC
ACAGTCACGA CCGCGACCAC CAGCGTTGTG CTCGAAGCAC TGGGTTACAA GACCCACACC
ACCATGATCT CGGTACCGGT GACCTACAAG TCGCTGGCCA CCGGCAAGGA CCTGGACGTG
TTTCTCGGCA ACTGGATGCC GACCATGGAG AACGACATCA AGCAGTACCG CGACGCCGGC
ACGGTAGAAA CCGTGCGCGC CAACCTGGAG AACGCCAAGT ACACCCTGGC AGTCCCCCAG
GCGCTGTACG ACAAGGGCCT GAAGGATTTC AGCGACATAC CCAAGTTCAA GAAGGAACTG
GACGGCAAGA TCTACGGCAT CGAACCGGGT AACGACGGTA ACCGCACCAT CCAGAGCATG
ATCGACAAGA ACGCCTTTGG CTTGAAGGAC GCCGGTTTCA AGATCGTGCA GTCCAGCGAG
GCGGGCATGC TGTCGCAAGT TGACCGCGCG CAGAAACGCG GCGAGGCATT GGTGTTCCTG
GGCTGGGAGC CACACCCGAT GAACACCCGC TTCAAGATGC AGTACCTGAC CGGCGGGGAC
GACTTCTTCG GCCCCGACTT CGGCAAGGCG ACCGTGCTGA CAAACACCCG CAAAGGATAC
ACGCAGGAAT GCAGCAACGT TGGCCAACTG CTTAAGAACC TGTCGTTCGA GCTCAAGGAT
GAAAGCACCA TGATGGGCTA TGTCCTGGAC GACAAGATGA AACCCGAAGC CGCCGCCAAG
AAATGGATCA AGGACAACCC AGGCAAGCTG GATGCCTGGC TGGCCGGCGT TACCACCGTT
GATGGCAAGC CTGGCCTGGA GGCGGTCAAG GCCAAGCTTA CGCAATAA
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| Protein sequence | MKGSPSLLLV ALLSAPLLAQ AAEPEQCQTV RFSDVGWTDI TVTTATTSVV LEALGYKTHT
TMISVPVTYK SLATGKDLDV FLGNWMPTME NDIKQYRDAG TVETVRANLE NAKYTLAVPQ
ALYDKGLKDF SDIPKFKKEL DGKIYGIEPG NDGNRTIQSM IDKNAFGLKD AGFKIVQSSE
AGMLSQVDRA QKRGEALVFL GWEPHPMNTR FKMQYLTGGD DFFGPDFGKA TVLTNTRKGY
TQECSNVGQL LKNLSFELKD ESTMMGYVLD DKMKPEAAAK KWIKDNPGKL DAWLAGVTTV
DGKPGLEAVK AKLTQ
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