| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0287 |
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| Symbol | |
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| ID | 1043936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 345597 |
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| End bp | 347843 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143666 |
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| Product | AsmA family protein |
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| Protein accession | NP_742454 |
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| Protein GI | 26987029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000233767 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCGT TCGGCAAAAT CCTGGGACTG GGGCTTCTCG GGTTACTGCT GATCATCGTG
GCGCTGGGCT TCGCCCTGAC CCACCTCTTT GATCCCAACG ACTACAAAGA CGAGATTCGC
CAGCTGGCAC GCGACAAGGC GCACGTCGAA CTGACCCTCA ACGGTGACAT CGGCTGGAGC
CTGTTCCCGT GGCTGGGCCT GGAGCTGCAC GAAGCCAGCA TCGCCACCTT GAACAAACCC
AAGGAACCGT TCGCCGACCT GCAGATGCTT GGCCTTTCGG TTCGTGTGCT GCCGCTGCTG
CGCCGCGAAG TGCAAATGAG CGACGTACGT GTCGAGGGCC TGAACCTGAC CCTGGCGCGT
GACGAACAGG GCCATGGCAA CTGGGAGGAC ATCGGCAAGC CGCTGCCCGC GCAGAATGGC
GCAAGCACCG ATGCATCCGC ACAGGCACCT GCCGAGCAGA CGCCTGCGAC CACCAACAGC
AACGACCGCG CCATCAAGCT GGACATCGAC AGCCTGACCG TGAACAACGC CCGCGTGCAG
TACACCGATG CCAAGACCGG CCACAGCTAC AGCGCCGAAA GCATCCAGCT GAGCACCGGC
CCGATCCACG AAGGCGCAAA CATTGCGCTC AAGGCCAGCG CCTTTATCAG CGCCAGCCAG
CCGAGCATCA AGGCCCGTAC CGAGCTGGCC GGCGAATTGC GTTTCGACCG CAAGCTCAAA
CGCTACAACT TCGAAGACAT GCGCCTGTCG GGCGAGACCT CGGGTGAGCC TACCGGCGGC
AAGACCGTGA CCTTCGCCGC CCAAGGCCAA CTGCTGGTCG ACCTGGCCGC CAATGTCGCC
TCATGGAACG GCCTGAAAGT CTCGGCCAAC CAACTGCGCG CCCTCGGTGA GCTGAACCTG
CGTGATCTGG ACAAGGCACC CCAGCTGAGC GGCGGCCTGT CCATCGCCCA GTTCAACCTG
CGCGCCTTCC TTGAAAGCAT TGGCCACCCG CTGCCGGCCA CCAACGACCC GGCCGCCTTC
GCCAAGCTGG AGCTGGTGAC TCGCCTGCTG GGCACACCCA GCAGCCTGGC CCTGGAAGAC
CTGGCGGTGA AGCTGGACGA CAGCACCTTC AGCGGCCGCG TGGCCGTCGA AGATTTCGCC
AAACAAGCCC TGCGCCTGCA ACTTAAGGGC GACACCTTCG ACGCCGACCG CTACCTGCCG
GCCAAGAGCG AAGAAGCCAA GGGCGCCACC GCTGCGCGCC AGGCCGAGGT CAAGCAACAA
GAGGCCAGCG CCGTAGCCGG TGCCGGCACC ACACCACTGC CCAACGCCCC AACACAAGTG
GCATGGAGCG ACGACAAGCT GCTGCCGGTC GACCGTCTGC GCGCCCTCGA CCTGCAGGCC
GACCTGGCCT TCGGCTCGTT GACCCTGGAT AAGCTGCCGA TCGAGAGCGC CCAGCTCAAG
GCCGTTGGCC AAGGCGGCCT GCTGACCCTG CAAACCCTGC GCGGAGAGCT GTACAACGGC
ACCTTCGAAG CCAAGGGCAC GGTCGACGTG CGCCCTGCCG TGCCACAGCT GGGTGTGAAC
ACCAATATCC AGCGGGTGCC GGTGGAACAC TTCATCAAGA CCGAAGGCAA GGAACAGACG
CCGCCGGTCA AGGGCCTGCT GACCCTGACC AGTGATCTGA CAGCCACCGG TAACAGCCAG
AAAGCACTGG TCGACACCCT GAACGGCAGC GCAAACTTCG CCATCAACGA TGGCGTGCTG
GTCAATGCCA ACCTGGAACA GCAGTTGTGC CAAGCCATCG CCACGCTCAA TCGCAAGACG
CTGAGCAGCG AACCACGCGG CAAGGACACC CCCTTCCAGG AGCTGCGCGG CAGCCTGGTG
GTACGCAATG GCGTCGCCAG CAACCCGGAC CTCAAGGCGC GCATCCCGGG CCTGACCGTC
AATGGCCATG GTGACCTCGA CCTGCGCGTG CTGGGCATGG ACTACAACAT CGGCATAGTC
GTCGAAGGCG ACCAGCGTGC CATGCCGGAC CCGGCCTGCC AGGTCAACGA ACGTTATGTG
GGTGTTGAAG TCCCCCTGCG CTGCCGTGGT CCGCTGGAAC TCGGCGCAAA GGCCTGCCGC
CTCGACCAGA ACGGCCTGGG CAAGGTTGCC GCCAAGCTGG CCGGCAACCG CCTGAAAGAC
AAGATCGATG AAAAACTTGA CGAAAAACTT GGAGACAAAG TGAGCCCGGA ACTGAAAGAC
GCGCTCAAGG GGCTGTTCAA CCGATGA
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| Protein sequence | MKAFGKILGL GLLGLLLIIV ALGFALTHLF DPNDYKDEIR QLARDKAHVE LTLNGDIGWS
LFPWLGLELH EASIATLNKP KEPFADLQML GLSVRVLPLL RREVQMSDVR VEGLNLTLAR
DEQGHGNWED IGKPLPAQNG ASTDASAQAP AEQTPATTNS NDRAIKLDID SLTVNNARVQ
YTDAKTGHSY SAESIQLSTG PIHEGANIAL KASAFISASQ PSIKARTELA GELRFDRKLK
RYNFEDMRLS GETSGEPTGG KTVTFAAQGQ LLVDLAANVA SWNGLKVSAN QLRALGELNL
RDLDKAPQLS GGLSIAQFNL RAFLESIGHP LPATNDPAAF AKLELVTRLL GTPSSLALED
LAVKLDDSTF SGRVAVEDFA KQALRLQLKG DTFDADRYLP AKSEEAKGAT AARQAEVKQQ
EASAVAGAGT TPLPNAPTQV AWSDDKLLPV DRLRALDLQA DLAFGSLTLD KLPIESAQLK
AVGQGGLLTL QTLRGELYNG TFEAKGTVDV RPAVPQLGVN TNIQRVPVEH FIKTEGKEQT
PPVKGLLTLT SDLTATGNSQ KALVDTLNGS ANFAINDGVL VNANLEQQLC QAIATLNRKT
LSSEPRGKDT PFQELRGSLV VRNGVASNPD LKARIPGLTV NGHGDLDLRV LGMDYNIGIV
VEGDQRAMPD PACQVNERYV GVEVPLRCRG PLELGAKACR LDQNGLGKVA AKLAGNRLKD
KIDEKLDEKL GDKVSPELKD ALKGLFNR
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