| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0248 |
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| Symbol | rimK |
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| ID | 1043821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 303246 |
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| End bp | 304151 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637143626 |
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| Product | alpha-L-glutamate ligase, RimK family |
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| Protein accession | NP_742416 |
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| Protein GI | 26986991 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0180089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATCG CTGTGCTGTC GCGCAATCCG CGTCTGTATT CCACCCGCCG CCTGGTCGAA
GCCGGTACCC AGCGTGGCCA CGAAATGGTG GTGATCGATA CCCTGCGGGC CTACATGAAC
ATTGCCAGCC ACAAGCCGCA GATCCACTAC CGCGGCAAGC CGCTGGAAGG CTTCGATGCC
GTGATCCCGC GCATAGGTGC TTCGGTTACG TTCTATGGCT GCGCGGTGCT GCGCCAATTC
GAAATGATGG GCGTATACCC GCTCAACGAG TCGGTAGCCA TTGCCCGCTC GCGCGACAAG
CTGCGCTCGT TGCAGCTGTT GTCGCGGCGC GGCATAGGCC TGCCGATCAC CGGTTTCGCC
CACTCGCCGG ACGACATCCC CGACCTGATC CAGATGGTCA ACGGTGCCCC GCTGGTGATC
AAGGTACTGG AAGGCACCCA GGGCATTGGC GTGGTGCTGT GCGAAACGCC CCAGGCGGCC
GAGTCGGTGA TCGAAGCGTT CATGGGCCTC AAGCAGAACA TCATGGTGCA GGAGTACATC
AAGGAGGCCG GTGGCGCAGA TATCCGATGC TTCGTGGTAG GCGACAAAGT AATTGCCTCG
ATGAAGCGTC AGGCCAAACC GGGCGAGTTC CGCTCCAACC TGCACCGGGG TGGCGTCGCC
AGCCTGATAA AAATCACCCC AGAAGAGCGC ATCACCGCCA TCCGGGCGGC CAAGGTGATG
GGGTTGAGCG TGGCGGGTGT GGATATCCTG CGCTCCAACC ACGGGCCTTT GGTGATGGAG
GTAAACTCGT CGCCAGGGCT GGAGGGCATC GAGGTCACCA CCGGCAAGAA CGTCGCCGGG
ATGATCATCG AGCACCTGGA GAAGAATGGC GGGCCCAATC AGACCCGGAC CAAGGGCAAA
GGCTGA
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| Protein sequence | MKIAVLSRNP RLYSTRRLVE AGTQRGHEMV VIDTLRAYMN IASHKPQIHY RGKPLEGFDA
VIPRIGASVT FYGCAVLRQF EMMGVYPLNE SVAIARSRDK LRSLQLLSRR GIGLPITGFA
HSPDDIPDLI QMVNGAPLVI KVLEGTQGIG VVLCETPQAA ESVIEAFMGL KQNIMVQEYI
KEAGGADIRC FVVGDKVIAS MKRQAKPGEF RSNLHRGGVA SLIKITPEER ITAIRAAKVM
GLSVAGVDIL RSNHGPLVME VNSSPGLEGI EVTTGKNVAG MIIEHLEKNG GPNQTRTKGK
G
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