Gene PP_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0205 
Symbol 
ID1043735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp256314 
End bp258038 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content63% 
IMG OID637143584 
Productputative oxidoreductase 
Protein accessionNP_742374 
Protein GI26986949 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.321427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.765338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC AGACCCAGGA CTACGACATC ATCATCATCG GTGGCGGTAC GGCCGGGCCG 
ATGGCGGCGA TCAAGGCCAA GGAGCAGGAC AAAAGCCTGC GCGTGCTGCT GCTGGACAAG
GCCAATGTCA AGCGCAGCGG TGCCATTAGT ATGGGCATGG ACGGCTTGAA CAACGCCATC
ATCCCCGGCC ACGCCACCCC CGAGCAGTAC ACCAAGGAAA TCACCGTGGC CAATGACGGC
ATCGTCAACC AGGCCACCGT GCATGCCTAC GCAACCCACA GCTTTGAAAC CATCGAGCAA
CTCGACCGCT GGGGCGTGAA GTTCGAGAAG GACGAGACCG GCGACTACGC GGTGAAGAAG
GTTCACCACA TGGGCGCGTA CGTGCTGCCC ATGCCCGAAG GCCACGACAT CAAGAAGGTG
TTGTACCGCC AGCTCAAGCG TGCCCGGGTG GAGATCAGCA ACCGTCTGGT CTGCACCCGT
GTGCTGCTCG ATGGCGAAGG CGCCGCCGCG GGTGTGCTGG GCTTTGACTG CCGCAGCGGC
GAGTTTCGGG TGGCGCGGGC CAAGGCGGTG ATCCTTGCCT GCGGCGCCGC CGGGCGCCTG
GGCCTGCCGT CTTCGGGCTA TTTGATGGGC ACCTACGAGA ACCCGACGAA CGCCGGTGAT
GGCTACGCCA TGGCCTACCA CGCAGGCGCC GAGCTGGCCA ACCTCGAGTG CTTCCAGATC
AACCCGCTGA TCAAGGACTA CAACGGCCCG GCCTGTGCCT ACGTCACCGG CCCGCTGGGT
GGGTACACCG CCAACAGCAA AGGCGAGCGC TTCATCGAGT GCGACTACTG GAGCGGCCAG
ATGATGTGGG AGTTCCACCA GGAGCTCGAA GGCGGCAATG GCCCGGTGTT CCTCAAACTG
GACCACTTGG CCGAAGAGAC CATCCAGAAC ATCGAAGAGA TCCTGCACAG CAACGAGCGC
CCCAGTCGTG GTCAGTTTCA CGCCGGGCGT GGCACCGACT ACCGCCAACA CATGGTCGAG
ATGCATATCT CCGAGATCGG TTTCTGCTCC GGTCATTCGG CGTCGGGCGT GTGGGTCAAT
GAAAAGGCCG AGACCAGCGT CAAAGGGCTG TATGCCGCAG GCGACATGGC TGCGGTGCCG
CACAACTACA TGCTCGGCGC CTTTACCTAT GGCTGGTTTG CCGGAGTGAA CGCCGCCCAT
TACGTGGCCG GGCGCGAACT CGCCGAGGTC GATGCCGAGC AGGTCGAACG CGAACGGGCG
CGGGTGTTTG CCCCGCTGCA GCGTGAGCAT GGCCTGCCGC CAGCCCAGGT CGAGTACAAG
CTCAGGCGCA TGGTCAACGA CTACCTGCAG CCGCCGAAGG TGACCAAGAA GATGGAAATC
GGCCTGGCGC GCTTTGCCGA GATCGAGCGT GATCTGGAGC AGATGAAGGC CAACAACCCT
CATGAGCTGA TGCGTGCGAT GGAAGTGTCG GTGATTCGCG ATTGCGCCGA GATGGCGGCG
CGGTCCTCGC TGTTCCGCGA GGAAAGCCGC TGGGGCCTGT ACCACCACCG GGTGGACTTC
CCTGAGCGCA ACGATGGCGA GTGGTTCTGC CATTGCCACC TGAAAAAAGG CGAGAACGGT
GAAATGACCA GCTTCAAGAA GGCCGTCGAA CCCTACCTGA TCGCCCTGGA CGCCGATGAG
CAGACCGCCT ATGACCGGCT GCGAGTGAAG GCTGATGCAG CGTGA
 
Protein sequence
MSIQTQDYDI IIIGGGTAGP MAAIKAKEQD KSLRVLLLDK ANVKRSGAIS MGMDGLNNAI 
IPGHATPEQY TKEITVANDG IVNQATVHAY ATHSFETIEQ LDRWGVKFEK DETGDYAVKK
VHHMGAYVLP MPEGHDIKKV LYRQLKRARV EISNRLVCTR VLLDGEGAAA GVLGFDCRSG
EFRVARAKAV ILACGAAGRL GLPSSGYLMG TYENPTNAGD GYAMAYHAGA ELANLECFQI
NPLIKDYNGP ACAYVTGPLG GYTANSKGER FIECDYWSGQ MMWEFHQELE GGNGPVFLKL
DHLAEETIQN IEEILHSNER PSRGQFHAGR GTDYRQHMVE MHISEIGFCS GHSASGVWVN
EKAETSVKGL YAAGDMAAVP HNYMLGAFTY GWFAGVNAAH YVAGRELAEV DAEQVERERA
RVFAPLQREH GLPPAQVEYK LRRMVNDYLQ PPKVTKKMEI GLARFAEIER DLEQMKANNP
HELMRAMEVS VIRDCAEMAA RSSLFREESR WGLYHHRVDF PERNDGEWFC HCHLKKGENG
EMTSFKKAVE PYLIALDADE QTAYDRLRVK ADAA