Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0204 |
Symbol | |
ID | 1043733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 255568 |
End bp | 256317 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637143583 |
Product | GntR family transcriptional regulator |
Protein accession | NP_742373 |
Protein GI | 26986948 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.168827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC TGCTCCCCCT GTCCCCGGTA CCGCTCTATA CCCAGCTCAA GGAACTGCTA CGCGAGCGCA TCCTCGACGG TACTTATCCA TCACATAGCC GCATGCCCTC GGAAAGCGAA CTGGGCAAGG CCTTCGACGT CAGCCGCATC ACCGTGCGCC AGGCGCTGGG CGACCTGCAA AAGGAAGGGC TGATCTTCAA GATCCACGGC AAAGGCACGT TCGTTGCCAA GCCCAAGGCG TTCCAGAACG TCAGTACCTT GCAGGGCTTG GGCGAGTCGA TGACGCAGAT GGGTTACGAA GTGATCAACC GCCTGCGCAG CTTTCGCCAT GTGCCGGCCA ACGCATTGGT TGCCGCCCGG CTGCAGGTCG AGGAGGGTAG CTTGGTCACC GAGATCCGCC GGGTGCGCCT GATCAACCGC GAGCCGGTGT CGCTGGAACT GACGTGGCTG CCCAAGGCCG TCGGCGAAAA ACTGGAGAAG GCCGATCTGG TCACCCGTGA CATCTTCCTG CTGTTGGAAA ACGACTGCGG CATCGCTCTT GGCCACGCCG ACCTGGCCAT CGATGCGGTA TTGGCCGACA GCGACCTGAC CCAGGCCCTG GATGTTGAAG AAGGCTCGCC GATCATGCGC ATCGAGCGCC TGACCCATGC TGCCGACGGC ACGCCGCTGG ACTTCGAACA CCTTTACTAC CGCGGCGATG CCTTCCAGTA CCGCCTGCGC ATTGATCGTC AGAAAGGGGG CAAGGCATGA
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Protein sequence | MAELLPLSPV PLYTQLKELL RERILDGTYP SHSRMPSESE LGKAFDVSRI TVRQALGDLQ KEGLIFKIHG KGTFVAKPKA FQNVSTLQGL GESMTQMGYE VINRLRSFRH VPANALVAAR LQVEEGSLVT EIRRVRLINR EPVSLELTWL PKAVGEKLEK ADLVTRDIFL LLENDCGIAL GHADLAIDAV LADSDLTQAL DVEEGSPIMR IERLTHAADG TPLDFEHLYY RGDAFQYRLR IDRQKGGKA
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