Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0132 |
Symbol | |
ID | 1043632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 138721 |
End bp | 140502 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143504 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | NP_742302 |
Protein GI | 26986877 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGC CGCCCATGAA GCTGCGTACG CGGCTTTTCC TCAGCATCTC GACGCTCGTC ACCGTGGCGT TGCTGGGGCT GCTGCTGGGT CTGGTCAGCA TGCTGCAGAT GGCTACAGTG CAACAGCGAC TGGTGCGCGA TACCACCCAT GCCCTGGAAG TGGGGCTGAA GTTGCGCCAG AACCTGGGCG AACAGCTGAT GCTGATTCTC GATGAAGACA CCGCCCCAGA AAGCCTGCGG CTGCTGCAGG ACAACTTCCA GGACCTGCTC AACCAAGGGC TGGAACAAGG CGGTGAGCGC ACCGGTTTCA GCAAGGCGAG CAGCAATTAC CAGGCCTTCC TCCAGACCTA TCGCGACAGC GCCACACCCG CTCGCAGCAT GGGTGTCGAT CAGCCTCTTG GGGCCGCGTT CAATCAGGTG CGCACCGACC TCATCGATTC CCACAAGCAG GCATTGGACC TGATTACCCG TAGCGAGGAA CGCACCCGTG ACCGCGCATT GCTGGTCAGT GGTGTACTCG GCCTGATGGG GTTGGTGGTG TTGGTACTGG GCTTTATCAC CGCGCACAAC ATCGCCCGGC GTTTCGGCCA GCCGATCGAA GCCTTGGCCA AGGCGGCCGA CCAGTTGGGC AAGGGCAATT TCGATGTGAC CTTGCCGGTC ACCCAGGCCG CCGAGCTCAA CCAGCTGACC CGCCGTTTTG GTCTGATGGC CGATGCCTTG CGCAAGCACC AGGCCACCAA CGTCGACGAG CTGCTGGCCG GCCAGCAGCG TTTACAGGCG GTACTCGACA GCATCGACGA CGGCCTGCTG ATCATCGACC GTCAGGGCCG CCTCGAGCAC CTCAACCCGG TGGCGCAGCG CCAGCTGGGC TGGAACGACA GCCGCTTGGG CAGCAGCCTG GTCGAAGCCC TGCAGCGCCC CGAGCTTGAG CAACAACTGC GCCAGGTTCT GCGCGGGGGC AGCCTCGACC GCCCACCGGA CGACCTGAAC ATGGAGGTCG ATGAAGAATC ACGTCTGCTC ACCTACAGCC TGACCCCGGT CAGCCACCCG CAGGGACCAA TCCTCGGCGC GGTGATGGTG CTGCACGATG TGACCGAGCA AAGGGCCTTC GAGCGGGTGC GCAGCGAATT CGTGCTGCGC GCCTCCCACG AACTGCGTAC CCCGGTGACC GGCATGCACA TGGCCTTCGG CCTGCTGCGC GAGCGGGTCA AGTTCCCGCC CGAAGCCCGC GAGAACGACC TGCTGGAAAC CATCGGCGAA GAAATGCAGC GTCTTACCCA ACTGATCAAC GACCTGCTCA ACTTCTCCCG TTATCAGAGC GGTTTGCAAA AGCTCGAGCT GGCCCCCTGT GCCATCGACG ACCTGCTGGA CCACGCGCAA TCGCGCTTTG CCGAACAGGC CGCGCACAAG CAGATCGAGT TGATCAAGGA ACTGGACCCG CCGCTACCGC GTATCCAGGC CGACGTCGCC CAGTTGGACC GAGTGCTGGA CAACCTGCTG CACAACGCCA TCCGCCATAC CGCCAACGGC GGGCGCATCC GCCTGCATGC CAGACGGCAT GCAGAACGGG TGATCATCAG CGTCGAGGAC AACGGAGAGG GCATTTCCTA TGGGCAACAA GCGCGCATCT TCGAGCCTTT CGTGCAGGTA GGTCGCAAGA AAGGCGGCGC TGGGCTGGGG CTCGCGCTGT GCAAGGAAAT TGTGCAGCTG CACGGCGGGC GCATGGGCGT GTTTTCGCGG CCGGGGCAGG GGACCCAGTT CTACATGGCG TTGCCGGTCT GA
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Protein sequence | MKWPPMKLRT RLFLSISTLV TVALLGLLLG LVSMLQMATV QQRLVRDTTH ALEVGLKLRQ NLGEQLMLIL DEDTAPESLR LLQDNFQDLL NQGLEQGGER TGFSKASSNY QAFLQTYRDS ATPARSMGVD QPLGAAFNQV RTDLIDSHKQ ALDLITRSEE RTRDRALLVS GVLGLMGLVV LVLGFITAHN IARRFGQPIE ALAKAADQLG KGNFDVTLPV TQAAELNQLT RRFGLMADAL RKHQATNVDE LLAGQQRLQA VLDSIDDGLL IIDRQGRLEH LNPVAQRQLG WNDSRLGSSL VEALQRPELE QQLRQVLRGG SLDRPPDDLN MEVDEESRLL TYSLTPVSHP QGPILGAVMV LHDVTEQRAF ERVRSEFVLR ASHELRTPVT GMHMAFGLLR ERVKFPPEAR ENDLLETIGE EMQRLTQLIN DLLNFSRYQS GLQKLELAPC AIDDLLDHAQ SRFAEQAAHK QIELIKELDP PLPRIQADVA QLDRVLDNLL HNAIRHTANG GRIRLHARRH AERVIISVED NGEGISYGQQ ARIFEPFVQV GRKKGGAGLG LALCKEIVQL HGGRMGVFSR PGQGTQFYMA LPV
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