| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0094 |
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| Symbol | |
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| ID | 1043576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 99757 |
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| End bp | 100407 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143466 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_742264 |
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| Protein GI | 26986839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0048007 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCAGC AAAACATCCT CTTCGACCTC GACGGCACCC TGACCGACCC ACGCCTGGGC
ATCACTCGCT CGATCCAGTA CGCCCTGGCC AAGCTGGGCA TCGACGAACC GGACCTGGCC
CGCCTCGAAC ACTTCATCGG CCCACCCCTG CTGCAGGCTT TCATGCAGTT CTACAGCTTC
GACGAAGCCA AGGCCTGGGA TGCGGTGAAC TTCTACCGCG AGCGCTTCCG CGTGACCGGT
CTTTACGAAA ACCTCGTGTT CGAAGGTGTG CCGGAGTTGC TTGAGGCCCT GAACGGGCAG
GGCCGCACGC TGTACATTGC CACCTCCAAA CCATGGGAGT TCGCCCGCGA AATCGCTCGG
CACTTTGCGT TCGATCATCA CTTCAAGGTG ATCTACGGCA GTGAACTGGA CGGCACGCGC
ACCAACAAGG TCGAGCTGAT TCGCCATTTG CTGGATGAAG AAGGGCTGGA CCCGGCGCAA
ACCCTGATGA TCGGGGACCG CAAGCATGAC CTGATCGGCG CGCGCAGCAA CGGGCTGCAG
GCCGTCGCGG TGGGGTACGG GTTTGGGAGC CGGGAAGAGC TGATGGCAGA AGAACCCGCT
TTCCACTTCG CCACGGTAGC CGATTTGCAT CAGGCTTTTA TCAAGGCTTG A
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| Protein sequence | MHQQNILFDL DGTLTDPRLG ITRSIQYALA KLGIDEPDLA RLEHFIGPPL LQAFMQFYSF
DEAKAWDAVN FYRERFRVTG LYENLVFEGV PELLEALNGQ GRTLYIATSK PWEFAREIAR
HFAFDHHFKV IYGSELDGTR TNKVELIRHL LDEEGLDPAQ TLMIGDRKHD LIGARSNGLQ
AVAVGYGFGS REELMAEEPA FHFATVADLH QAFIKA
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