| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0088 |
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| Symbol | |
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| ID | 1043569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 95679 |
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| End bp | 96683 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143460 |
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| Product | luciferase family protein |
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| Protein accession | NP_742258 |
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| Protein GI | 26986833 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00161707 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAGC TGCGTGACCT GAAGATTTCC ACCCTGGACC TGGTGCCCGT ACGCGCCGAC
GCTGGCCCCG CGCAATCGCT GCGCAACTCG CTGGACCTGG CGCAGCATGT CGAGCGCTTT
GGCTATAACC GCTTCTGGGT GGCCGAGCAC CACAACATGG ACGGCATCGC CAGTTCGGCG
ACTGCGGTGC TGATCGGCTA CCTGGCCGGG GGGACCTCAC GTATTCGCGT GGGCTCTGGC
GGGGTGATGC TGCCCAACCA TGCGCCACTG GTGATCGCCG AGCAGTTCGG CACCTTGGCC
AGCCTGTATC CGGGGCGTAT CGACCTTGGC CTGGGCCGTG CACCGGGTTC GGACCAGATG
ACGGCCTATG CCCTGCGACG CGACCGTGCC GGCGGCCCGG ACGACTTCCC AGACGATGTC
GAGGAGCTTT CGCGCTACCT CGGGCCACGC ACTGATGATC AAAAAGTGAT CGCCGTACCG
GGGTACGACA CCGACGTGCC GATGTGGTTG CTGGGATCCA GCCTGTTCAG TGCCCAGCTG
GCGGGCATGC GCGGCATGCC CTACGCCTTC GCCTCGCATT TCGCGCCACG CTACATGCAC
GAGGCCATTC GCGTGTACCG CAACCATTTC AAGCCCTCGA CCACGCTGGA CAAGCCGTAT
GTGATGCTGG GCATTCCCAT GGTGGTGGCG CAGACCGACG AGAAGGCCGA ATACCTGGCC
ACCTCGGTCT ACCAGCGCAT CCTGGCGCTG ATTCGCGGCC AGAGCCTGAT GCAGAAGCCA
CCCGTGGAAA GCATGGATGG GCTGTGGTTG CCCCATGAGC GAGAGACGGT GGGCAGCTTC
CTGGGGCTGG CCATGATCGG CAGCCCGCGG AAGGTAAAGG CCAAGGTAGA AGTGCTGCTG
GAACAGACGG GTGCGGATGA GCTGATCTTT ACCTGTGACC TGTATGAGCA TGCGGACCGC
ATTCGGTCAT ATGAGCTGAT GGCGCAGGCC CTCAAGACCG AGTGA
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| Protein sequence | MTQLRDLKIS TLDLVPVRAD AGPAQSLRNS LDLAQHVERF GYNRFWVAEH HNMDGIASSA
TAVLIGYLAG GTSRIRVGSG GVMLPNHAPL VIAEQFGTLA SLYPGRIDLG LGRAPGSDQM
TAYALRRDRA GGPDDFPDDV EELSRYLGPR TDDQKVIAVP GYDTDVPMWL LGSSLFSAQL
AGMRGMPYAF ASHFAPRYMH EAIRVYRNHF KPSTTLDKPY VMLGIPMVVA QTDEKAEYLA
TSVYQRILAL IRGQSLMQKP PVESMDGLWL PHERETVGSF LGLAMIGSPR KVKAKVEVLL
EQTGADELIF TCDLYEHADR IRSYELMAQA LKTE
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