| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0076 |
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| Symbol | |
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| ID | 1043557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 86861 |
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| End bp | 87802 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637143448 |
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| Product | glycine betaine-binding protein, putative |
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| Protein accession | NP_742246 |
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| Protein GI | 26986821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000390865 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGAAGAG AGGCCGCCAT GCACAAGTTC TCCGCCGCCG TGTTCGCCCT GGCCCTGAGT
GCCACCACGG CCCACGCCGC AGACAGCGAT GCGCAATGCA GTACCGTGAA AATGGCCGAC
CCCGGCTGGA GTGATATTGC CTCGACCAAT GCCGTGGCAC GCCTGTTACT GGAAAGCCTG
GGTTACCAGG TGAAGATCGA CAGCCTGGCC GTACCGATCA TCTACGGCGG CCTCAAGGAC
GGCCAGGTCG ACGCCTTCCT CGGAAACTGG ATGCCGGCGC AGCAAGGCTT CCATGACAAG
TTCATCGCCA ATGGCGATGT GCAGCAGCTG TCGCGCAACC TGGAGGGAAC CGAGTTCACC
CTCGCAGTGC CCGACTATGT GTGGAATGCC GGGGTGAAGG ACTTCGCTGA CCTGCAAAAA
CACGCCGGGC AGTTCGACAA AAAACTGTAC GGAATCGGCT CCGGCGCCCC GGCTAACCTG
TCGCTCAAGG CAATCATCGA CAAGAATGAA TTCAACCTCG GCCAGTGGAA GCTGGTGGAG
TCCAGCGAGC AGGCGATGCT GGCCCAGGTC GACCGGGCGG TGAAGAAGCA GCAATTCATC
ACCTTCCTTG GCTGGACCCC GCACCCGATG AACGTGAAGC TGAAAATGCA TTACCTGACC
GGCGGGGAAA AGTGGTTCGG CAGCAAGGGC GAGGTATACA CGCTGACGCG CAAGGGTTAT
CCACAAGCCT GCCCGAATGC CGCGAAGCTG CTGGGTAACC TCAAGTTCAC ACTGGACATG
GAAAACAGCA TCATGGCCGA GGTGGTAGAC AAGAAGATCA GCTTCGATGA AGCGGCCAAG
GCCTGGGTGA AAGCGCATCC TGAACGGTTG GATGGGTGGT TGGCCGGAGT TACCACCAAG
GCCGATGGGG ATGCCCTGGA GGCCGTCAAA GCCAAACTGT AA
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| Protein sequence | MRREAAMHKF SAAVFALALS ATTAHAADSD AQCSTVKMAD PGWSDIASTN AVARLLLESL
GYQVKIDSLA VPIIYGGLKD GQVDAFLGNW MPAQQGFHDK FIANGDVQQL SRNLEGTEFT
LAVPDYVWNA GVKDFADLQK HAGQFDKKLY GIGSGAPANL SLKAIIDKNE FNLGQWKLVE
SSEQAMLAQV DRAVKKQQFI TFLGWTPHPM NVKLKMHYLT GGEKWFGSKG EVYTLTRKGY
PQACPNAAKL LGNLKFTLDM ENSIMAEVVD KKISFDEAAK AWVKAHPERL DGWLAGVTTK
ADGDALEAVK AKL
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