| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0067 |
|---|
| Symbol | fmt |
|---|
| ID | 1043548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 77540 |
|---|
| End bp | 78472 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637143439 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | NP_742237 |
|---|
| Protein GI | 26986812 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.196453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000439837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG TCTTTGCAGG CACTCCAGAG TTTGCCGCCG AACACCTCAA GGCCCTGCTC
GACAGCCCCT ACGAGATCGT GGCCGTCTAC ACCCAGCCCG ACCGCCCGGC CGGCCGTGGC
CAGAAGCTGA TGCCAAGTGC GGTCAAGGCA CTGGCCGTGG CCCATGACAT CCCGGTGTTC
CAGCCGCAGA CCCTGCGCAA TGCCGATGCG CAGGCCGAAC TGGCCGCACT GAAACCAGAC
CTGATGGTAG TGGTCGCCTA CGGCCTGATC CTGCCGCAGG TGGTGCTGGA TATCCCGCGC
CTGGGTTGCA TCAACAGCCA CGCTTCCCTG CTGCCACGCT GGCGCGGTGC CGCGCCGATC
CAGCGTGCCG TGGAAGCTGG CGACGCCGAA AGCGGCGTGA CCGTGATGCG CATGGAGGCC
GGCCTGGACA CCGGCCCGAT GCTGCTCAAG GTAGTCACCC CGATCAGCGC CGAGGACACC
GGCGGCACCT TGCACGATCG CCTGGCCGAA ATGGGCCCGC CCGCAGTGGT TCAGGCCATC
GCCGGCCTGG CTGACGGTTC GCTGCAAGGC GAAATACAGG ACGATGCCCT GGCCACCTAC
GCGCACAAAC TGAACAAGGA CGAAGCGCGT ATCGACTGGA CCCACCCGGC TGTCGAGCTG
GAACGCCTGA TCCGCGCCTT CAACCCATGG CCGGTGTGTC ACAGCACTCT GGATGGTGAA
AGCGTCAAGG TGCTGGCCGC CAACCTGTCC ACAGGCCAAG GCGCCCCAGG CGAGATACTT
TCCGCCAGCA AGGACGGCCT CGTAGTTGCG TGCGGTGACC AAGCCCTGAG CCTGACCCGC
CTGCAACTGC CTGGCGGCAA GGCATTGAGC TTCAGTGACC TGTTCAACAG CCGCCGCGAG
AAGTTCGCCG CCGGCAAGGT GCTGGGCCAA TGA
|
|---|
| Protein sequence | MRIVFAGTPE FAAEHLKALL DSPYEIVAVY TQPDRPAGRG QKLMPSAVKA LAVAHDIPVF
QPQTLRNADA QAELAALKPD LMVVVAYGLI LPQVVLDIPR LGCINSHASL LPRWRGAAPI
QRAVEAGDAE SGVTVMRMEA GLDTGPMLLK VVTPISAEDT GGTLHDRLAE MGPPAVVQAI
AGLADGSLQG EIQDDALATY AHKLNKDEAR IDWTHPAVEL ERLIRAFNPW PVCHSTLDGE
SVKVLAANLS TGQGAPGEIL SASKDGLVVA CGDQALSLTR LQLPGGKALS FSDLFNSRRE
KFAAGKVLGQ
|
|---|
| |