Gene PP_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0060 
SymbolglyS 
ID1043541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp69850 
End bp71904 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content64% 
IMG OID637143432 
Productglycyl-tRNA synthetase subunit beta 
Protein accessionNP_742230 
Protein GI26986805 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000538802 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTGCTC AAGATTTCCT GGTAGAACTG GGCACCGAAG AGCTGCCACC CAAGGCCCTC 
GCCAGCCTTG GCGACGCCTT CCTGGCCGGT ATCGAAAAAG GCCTGCAGGC TGCTGGCCTG
AACTACACCG GCAAGCAGGT GTACGCCGCG CCGCGTCGTC TGGCCGTGCT GATTCGCCAG
CTGGACGTGC AGCAACCTGA CCGCAGCATC AACATCGACG GCCCGCCCCT GCAGGCTGCC
TTCAACGCCG AAGGCGAGCC GACCCAGGCT GCGCTGGGCT TCGCCAAGAA GTGCGGTGTG
GAACTGGCCG AGATCGACCA GAGCGGCCCC AAGCTGCGCT TCTCCCAGCA CATCCCGGGC
AAGGCTACCG TTGGGCTGCT GCCGACCATC GTCGAAGATT CGCTGAACGA CCTGCCGATT
CCCAAGCGCA TGCGCTGGGC GGCCAGCCGT GAAGAGTTCG TGCGCCCGAC CCAATGGCTG
GTGATGCTGC TGGGCGATCA GGTGGTCGAT TGCACCATCC TGTCGCAGAA GGCCGGGCGT
GAATCCCGTG GCCACCGCTT CCACCATCCG GAAAACGTGC TCATCACCAC CCCGGCCAAC
TACGTCGAAG ACCTGCGCAA GGCCTACGTC CTGGCCGACT TCGCCGAGCG CCGCGAGCTG
ATCAGCAAGC GTACCGCAGA GCTGGCCATG CAGCAGGAAG GCACGGCCAT CGTGCCACCG
GCGCTGCTGG ACGAAGTGAC CGCTCTGGTC GAGTGGCCGG TGCCGCTGGT GTGCTCGTTC
GAGGAGCGTT TCCTCGAGGT GCCGCAAGAA GCCCTGATCA CCACCATGCA GGACAACCAG
AAGTACTTCT GCCTGCTGGA CAGCGAAGGC AAGCTGCTGC CGCGCTTCAT TACCGTGGCC
AACGTCGAAA GCCGCGACCC GAAGCAGATC GTGCAAGGCA ACGAAAAAGT CGTGCGCCCG
CGCCTGACCG ACGCCGAGTT CTTCTTCAAG CAGGACAAGA AGCAGCCACT GGAAACCTTC
AACGAGCGCC TCAAGAACGT GGTGTTCCAG GCTCAGCTCG GCACCGTGTA CGACAAGGCC
GAACGTGTTT CCAGGCTGGC CGCCTTCATT GCTCCGCTGA TCGGCGGCGA CGCCCAGCGC
GCTGGCCGTG CCGGCCTGCT GTCGAAGTGC GACCTGGCCA CCGAGATGGT CGGCGAATTC
CCTGAAATGC AGGGTGTTGC CGGTTACTAC TACGCGCTCA ACGACGGTGA GCCGGAAGAC
GTAGCCCTGG CCCTGAACGA GCAGTACATG CCGCGCGGTG CAGGCGCCGA GCTGCCGCAG
ACCCTGACCG GTGCTGCCGT GGCCATCGCC GACAAGCTCG ACACCCTGGT GGGTATCTTT
GGCATCGGCA TGCTGCCTAC CGGCAGCAAG GACCCGTACG CCCTGCGCCG TGCTGCTCTG
GGCGTGCTGC GTATCCTGAT CGAGAAGCAA CTGGACCTGG ACCTGACCGG CGCGGTTGAG
TTTGCGGTCA AGCAGTTCGG CGCCAAGATC AAGGCCCCCG GCCTGGCCGA GCAAGTACTG
GAGTTCATTT TCGACCGCCT GCGCGCGCGT TACGAAGACG AAGGCATCGA CGTCGCCACG
TACCTGTCGG TACGCGCACT GCAGCCAGGC TCCGCCCTGG ACTTCGACCA GCGCGTACAA
GCCGTGCAGG CGTTCCGCAA ACTGCCGGAA GCCGAGGCCC TGGCCGCGGT GAACAAGCGC
GTGTCGAACC TGCTGAGCAA GGCCGAAGGA GCCATCGCCG AGCAGGTCGA GCCGAAGTAC
TTCGACAATG CCAACGAGTT CTCCCTGTAC TCGGCCATCC AGCAGGCCGA CCAGGCCGTG
CAACCGATGG CTGCAGCACG TCAGTACAGC GAATCGCTGG CCCGCCTGGC GGCCCTGCGT
GACCCGGTCG ATGCCTTCTT CGAGGCGGTC ATGGTCAACG CCGAAGACGC CAAGGTACGT
GCCAACCGTT ATGCCCTGCT CAGCCGTCTG CGCGGCCTGT TCCTGGGCGT GGCTGACATT
TCGCTGCTGG GGTAA
 
Protein sequence
MSAQDFLVEL GTEELPPKAL ASLGDAFLAG IEKGLQAAGL NYTGKQVYAA PRRLAVLIRQ 
LDVQQPDRSI NIDGPPLQAA FNAEGEPTQA ALGFAKKCGV ELAEIDQSGP KLRFSQHIPG
KATVGLLPTI VEDSLNDLPI PKRMRWAASR EEFVRPTQWL VMLLGDQVVD CTILSQKAGR
ESRGHRFHHP ENVLITTPAN YVEDLRKAYV LADFAERREL ISKRTAELAM QQEGTAIVPP
ALLDEVTALV EWPVPLVCSF EERFLEVPQE ALITTMQDNQ KYFCLLDSEG KLLPRFITVA
NVESRDPKQI VQGNEKVVRP RLTDAEFFFK QDKKQPLETF NERLKNVVFQ AQLGTVYDKA
ERVSRLAAFI APLIGGDAQR AGRAGLLSKC DLATEMVGEF PEMQGVAGYY YALNDGEPED
VALALNEQYM PRGAGAELPQ TLTGAAVAIA DKLDTLVGIF GIGMLPTGSK DPYALRRAAL
GVLRILIEKQ LDLDLTGAVE FAVKQFGAKI KAPGLAEQVL EFIFDRLRAR YEDEGIDVAT
YLSVRALQPG SALDFDQRVQ AVQAFRKLPE AEALAAVNKR VSNLLSKAEG AIAEQVEPKY
FDNANEFSLY SAIQQADQAV QPMAAARQYS ESLARLAALR DPVDAFFEAV MVNAEDAKVR
ANRYALLSRL RGLFLGVADI SLLG