| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0057 |
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| Symbol | |
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| ID | 1043538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 66693 |
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| End bp | 68312 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637143429 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_742227 |
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| Protein GI | 26986802 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0623075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000533342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCGGATT ACATCCAAGA GCAGGGGGCG GCGGCCAGTA GCTCCAGCCG CCGTGAAGAA
CGCAAGATCA TTTTCGCGTC ATCCCTCGGG ACGGTTTTCG AGTGGTATGA CTTTTTTCTC
TATGGTGCGC TGGCAGCGGT CATCAGCAAG CAGTTCTTCG CTGGCGTGAA CGATACCACC
GCTTTCATCT TCGCCCTGAT GGCCTTCGCT GCGGGCTTTC TGGTGCGGCC GTTTGGCGCG
CTGGTGTTCG GCCGCCTGGG TGACATGATC GGGCGCAAGT ACACCTTCCT GGTCACCATC
GTGCTGATGG GCCTGTCCAC TTTCGCTGTG GGGTTGTTGC CCACCTACGC CAGCATCGGC
ATCGCCGCAC CGATCATCCT GGTGATCCTG CGCATGCTTC AAGGGCTGGC GCTGGGCGGC
GAGTATGGCG GTGCAGCCAC TTACGTGGCC GAGCATGCGC CGCCTGGCAA GCGTGGCTTG
CACACTGGTT TCATCCAGTC CACCGCAACG CTGGGCCTGT TGTTGTCGCT CTTGGTGGTG
CTGGGTAGCC GGTATATCAG TGGCGACCAG TTCGAAACCT GGGGCTGGCG CTTGCCGTTC
CTGCTGTCGA TCGTGCTGTT GGCGATCTCC ACCTGGATTC GCATGAGCAT GCACGAGTCG
CCGGCCTTTG TGAAAATGAA GGCTCAGGGC AAGGTCAGCA AGTCGCCCAT CCGTGAGTCA
TTCACCTCCT GGCCAAACCT GAAAGTGGTG CTTACCGCCC TGTTCAGCAT CAACGCGGGG
CAGGCTGTGA CCTTCTACAC GGCGCAGTTC TACGTTCTGT TCTTCATGAC CCAGATGCTG
AAAATGGACT CGGCTCAGGC CAACACCCTG CTCATCATCA GCGTTGTGAT TGGCGCGCCG
TTCTTCGTGT TCTTCGGCTG GTTGTCCGAC CGTATCGGCC GCAAGCCGAT CCTGATGCTC
GGCCTGTTGC TGGCCACGGT ACTGTACTTC CCACTGTTCA AGGCGCTGAG CCACTACGCC
AACCCGCAGA TCGACGCTGC CAGCCGTCAG GCGCCGATCG TGGTCACCGC CGACCCGCAA
GGCTGCACAT TCCAGTTCGA CCCCGTGGGC AAGGCTCGTT TTGACAGCCC GTGCGACAAG
GTCAAGACCT TCCTGGTCAA GCAGGGCCTG CCGTACAGCT CGGTTAGCGT GGCCGGCAGT
GAAGTGGTGG TCAACATCGG TGACAAGACC ATCAACGGCT TTGACGAAAC CGCCATGCGT
GCTGCAATCG AGCAGGCTGG TTACCCGGCC AAGGCGGACC CTGCGCAGGT CAACCAGGTA
ATGGTGGTGG TACTGATCGT GGCGATGATC CTGATCGCGA CCATGACCTA TGGCCCGTTG
GCGGCGGTGA TGGTCGAGCT GTTCCCGACC CGCATCCGCT ACACCTCGAT GTCGCTGCCC
TATCACATTG GTAATGGCTG GTTTGGTGGT TTCCTGCCTA CCGTATCGTT TGCGCTGGTG
GTCTATACCG GGGATATCTT CTACGGGCTG TGGTACCCGG TGCTGGTGAC CGGGATCAGC
CTGGTGGTTG GGATCTTCTG TCTGAGAGAA ACCAAGGATG TAGATATCGA CAAAGTATGA
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| Protein sequence | MSDYIQEQGA AASSSSRREE RKIIFASSLG TVFEWYDFFL YGALAAVISK QFFAGVNDTT
AFIFALMAFA AGFLVRPFGA LVFGRLGDMI GRKYTFLVTI VLMGLSTFAV GLLPTYASIG
IAAPIILVIL RMLQGLALGG EYGGAATYVA EHAPPGKRGL HTGFIQSTAT LGLLLSLLVV
LGSRYISGDQ FETWGWRLPF LLSIVLLAIS TWIRMSMHES PAFVKMKAQG KVSKSPIRES
FTSWPNLKVV LTALFSINAG QAVTFYTAQF YVLFFMTQML KMDSAQANTL LIISVVIGAP
FFVFFGWLSD RIGRKPILML GLLLATVLYF PLFKALSHYA NPQIDAASRQ APIVVTADPQ
GCTFQFDPVG KARFDSPCDK VKTFLVKQGL PYSSVSVAGS EVVVNIGDKT INGFDETAMR
AAIEQAGYPA KADPAQVNQV MVVVLIVAMI LIATMTYGPL AAVMVELFPT RIRYTSMSLP
YHIGNGWFGG FLPTVSFALV VYTGDIFYGL WYPVLVTGIS LVVGIFCLRE TKDVDIDKV
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