| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0056 |
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| Symbol | |
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| ID | 1043537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 64943 |
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| End bp | 66595 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637143428 |
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| Product | GMC family oxidoreductase |
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| Protein accession | NP_742226 |
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| Protein GI | 26986801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000620913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGCACATGC CATCAGCCGA TTCTGTCTTC GACTACGTGG TCGTAGGGGC CGGCCCCGCC
GGATGCCTGC TGGCCAATCG TTTGTCCGCC GACCCTTCCT GCCGCGTGCT GCTGCTGGAG
GCGGGTGGCC GTGACAATTA TCCCTGGATC CACATCCCCG TTGGTTACCT CTACTGCATC
GGCAACCCGC GCACAGACTG GTGCTTCAAG ACCGAGGCAC AACCTGGCCT CGGCGGTCGC
GCTTTGGGTT ATCCAAGGGG CAAGGTGCTA GGTGGCTGTT CGTCGATCAA CGGCATGATC
TACATGCGGG GCCAAGCCGC CGACTACGAC CATTGGGCCG CGCAAGGCAA CGACGGCTGG
GCGTGGAAAG ATGTGTTACC GCTGTTCAAG GCCAGCGAAA ACCACTTTGC AGGCGCCAGC
GAGCACCACG GCGCGGAGGG CGAATGGCGG GTCGAGCGGC AACGCTACAG CTGGCCGATC
CTTGATGCTT TCCGAGATGC CGCCGAGCAG AGCGGTATTG GCAAGGTCGA CGATTTCAAC
ACCGGCGACA ACCAGGGTTG TGGATATTTT CAGGTCAACC AGCGCAGTGG TGTGCGCTGG
AATGCTTCCA AAGCTTTCCT GCGGCCGATC AAGGATCGCG CCAACCTCAC TGTGCTGACC
GGCGTGCAGG TTGACCAAGT ACTGCTCGAC AACACCCGCG CAAGGGCGGT GAAGGCGCTC
TGGCAAGGGG CCTGGCATGA GTTTGCGGCG CGCCGCGAGA TCATCCTCTG TGCTGGGGCG
GTAGGTTCAC CGGGCATCCT CCAGCGCTCC GGCATCGGCC CGCGCCAGTT GCTGGAAAGC
TTGGGTATTG GTGTTCGCCA CGACATGCCA GGCGTTGGTG GCAACTTGCA GGACCACCTG
CAACTGCGCC TGATCTACCA GATCCGCAAC ACCCGTACCT TGAACCAGAT GGCCAACAGC
CTGTGGGGCA AGATGGGCAT GGGCCTGCGT TACCTCTACG ACCGTAGCGG GCCGCTGGCC
ATGGCGCCGA GCCAGTTAGG CGCGTTCGTG CGTTCAAGCC CCGAACAGGC CACCGCCAAC
CTTCAGTATC ACGTGCAGCC GCTGTCACTG GAACGCTTCG GTGAGCCGTT GCATCAGTTC
CCGGCCTTTA CTGCCTCGGT GTGCAACCTG CGCCCGGCCA GCCGCGGGCG CATCGACATC
TGCAGCACCG ACATGAACAG CACGCCGCGG ATCGACCCCA ATTACCTCAG TGCTCCGCAG
GACTTGCGGG TTGCTGCCGA TGCCATTCGC CTTACCCGGC GCATCGTCCA GGCCCCTGCC
CTCGCCGCTT TCGAGCCCAA GGAATATTTG CCGGGCCCGG CGCTGCAAAG CGAGGAAGAC
CTGTTCGAGG CCGCTGGCAA GATCGGCACC ACCATCTTCC ACCCGGTCGG TACCTGTCGC
ATGGGCAACG GTGCCATGGA CGTTGTGGAT AACCAGCTGC GCGTGCATGG CATCCCCGGT
CTACGTGTAG CCGATGCTTC GATCATGCCG CAGATAACTT CCGGCAATAC GTGTTCCCCC
ACCCTGATGA TCGCCGAAAA GGCGGCGCAA CTGATCCTCA AAGGAGCTGC TACCCAGACC
TACCTGAACC AAGACGCGTT ACCGACGCCC TGA
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| Protein sequence | MHMPSADSVF DYVVVGAGPA GCLLANRLSA DPSCRVLLLE AGGRDNYPWI HIPVGYLYCI
GNPRTDWCFK TEAQPGLGGR ALGYPRGKVL GGCSSINGMI YMRGQAADYD HWAAQGNDGW
AWKDVLPLFK ASENHFAGAS EHHGAEGEWR VERQRYSWPI LDAFRDAAEQ SGIGKVDDFN
TGDNQGCGYF QVNQRSGVRW NASKAFLRPI KDRANLTVLT GVQVDQVLLD NTRARAVKAL
WQGAWHEFAA RREIILCAGA VGSPGILQRS GIGPRQLLES LGIGVRHDMP GVGGNLQDHL
QLRLIYQIRN TRTLNQMANS LWGKMGMGLR YLYDRSGPLA MAPSQLGAFV RSSPEQATAN
LQYHVQPLSL ERFGEPLHQF PAFTASVCNL RPASRGRIDI CSTDMNSTPR IDPNYLSAPQ
DLRVAADAIR LTRRIVQAPA LAAFEPKEYL PGPALQSEED LFEAAGKIGT TIFHPVGTCR
MGNGAMDVVD NQLRVHGIPG LRVADASIMP QITSGNTCSP TLMIAEKAAQ LILKGAATQT
YLNQDALPTP
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