Gene PP_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0049 
Symbol 
ID1043530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp56161 
End bp57627 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content54% 
IMG OID637143421 
Producthypothetical protein 
Protein accessionNP_742219 
Protein GI26986794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.770752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000766437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATCGC CGGCGGGCAC GCTCCGAGGC ATTGATGGAA TGCATTTTGA CGACTGCCGA 
GATCAGCGAA TGAAAGAAAT TGCTGCGCCG ATGTTCGATC TAATCGCTTT GTCGCTTCCA
CGAGGGTTGG GGTTTGGGGA CAGCCCGCCA GTAGGGGCAT GGCTTAGTGA GGACGGAATT
TCTTGTGCCG CTCTAACCCG AAATATCAAT TCCGGCAGCT TCGGAATTGT CACCTTGCGG
CGTCGTGTCG ATAGCGTGTG GGTGCTCCTC AGCCATGGTG AGTGCACCAC TGGCGAGTCC
GAAGCCCGCG CCTCAATCAG CCATTTTCTC TATACCCAAG CCCATCCGCT TCCACTCCCT
TCAGGTGAAC GACGACGTGC TCCTCTAAGC AGAATGGGTA AGCGCACACC AAGCGTGGTG
TTCAAATCAC TATTTGATCC AAGCCGCCGT ATTGGGGCGT GGGCGCTGAA TCAACTGTAT
CTCGCACTGC CATCCCCAGA CAGAAATTGG GTTCCCGATT GCCAGACTGA GAATTTTCAC
ACCCGCCTCT GGGAAGCCCA CCTATTAGCG ATTTTTCGTG AACAGGGACT CTTGGTCACC
CAGCCTAAAG AATCACCCGA TTTTCACATC GAGAATAGGC TGGGAGATGA GGCCTGGGTT
GAAGCAGTGA CAGCCAACCC GGAAGAGCGG TATGAGCATT TTGGCGCCTC GCCGGTCCCC
CCACCCGCTG ACCGACATGA GCGTTTCTTA GGAGCGGCTG CAGAAAGGTT TGCGAGGACC
ATCCAAAACA AATTGGACAA GCGTTACGAA TCCCTACCGC ACGTGGAGGG TAAGCCGCTC
ATTCTGGCCT TAGCCGATTT CCATGCGCCC AGTTCAATGC TGTGGAGCAG GGAGTCGCTC
ATCAGCTATC TCTATGGCTT TGCAGTTCAC TCATCTGCGC ATCGTGGTAC GCACCTGATA
ACTGTGGAGG AAGAGACATC TCTGCTATCA GGGCGCCCCA ACGGCCTATT TACGCTAATG
GAAAATGCCC ATCTTTCAGC GGTCATTTTC ACCAATGCCT GCACAGTGCC AAAGCTCAGC
CGAGTGCCGA TCTCAGGTGG AGCTCATCTA GACGGGTACC GATACTTGCG GTTTGGTGAG
TTTTTCGACC GTTCTCCGGG AGCATCACGA GGTATCCCAT TTCTGTTGGA TGTAGCGTCC
AGCGACTACG GTCAGCTCTG GCCGCAATAT GGCTACGAGC CGTGGTCTGC TGAAGTGGAG
GTATTCCATA ACCCTATGGC ACTATACCCG GTGCCTAATG AGTTGATACC AGAAGTCACC
CACTGGAGAG AAGTAAACGG AAGAGTCGAG TGCGAATCTT TCTTTGATGT ATCCATACTC
CGATCCAGAA CACTCGTCCT CAGTGCAAAC GCTAAGGTTC CGTCACTCGA TGAGTTGCTG
ACAGCAGCCA GTCCTCCAGA GCTCTGA
 
Protein sequence
MSSPAGTLRG IDGMHFDDCR DQRMKEIAAP MFDLIALSLP RGLGFGDSPP VGAWLSEDGI 
SCAALTRNIN SGSFGIVTLR RRVDSVWVLL SHGECTTGES EARASISHFL YTQAHPLPLP
SGERRRAPLS RMGKRTPSVV FKSLFDPSRR IGAWALNQLY LALPSPDRNW VPDCQTENFH
TRLWEAHLLA IFREQGLLVT QPKESPDFHI ENRLGDEAWV EAVTANPEER YEHFGASPVP
PPADRHERFL GAAAERFART IQNKLDKRYE SLPHVEGKPL ILALADFHAP SSMLWSRESL
ISYLYGFAVH SSAHRGTHLI TVEEETSLLS GRPNGLFTLM ENAHLSAVIF TNACTVPKLS
RVPISGGAHL DGYRYLRFGE FFDRSPGASR GIPFLLDVAS SDYGQLWPQY GYEPWSAEVE
VFHNPMALYP VPNELIPEVT HWREVNGRVE CESFFDVSIL RSRTLVLSAN AKVPSLDELL
TAASPPEL