Gene PP_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0046 
Symbol 
ID1043527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp52394 
End bp53737 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content56% 
IMG OID637143418 
Productporin, putative 
Protein accessionNP_742216 
Protein GI26986791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000582651 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA AAGTACCACT GTATTTGGCG GCAGTTTCTG CGCTGTCTGG AAGCTATGCT 
ATTTCGGCAC AAGCTGAAGA CAAGCCAGAA GGCTTCATTG AAGGCAGCAG CCTTACAGTG
TTGAACCGTA ACTTCTACTT CAACCGTGAT AACCGCGACA GCACCGCCCC CACTTACAAC
AGTGGCAAGG GCAATACGAA CGGCTACTCC GAAGCCTGGG CGCACGCGAT CATCAGCAAA
TTCAACTCCG GGTTTACCCA AGGTACCGTT GGCTTTGGCG TTGATGCCTT TGCCATGATC
GGCCTCAAGC TCGACACCGG TGATGGGCGC AACGGCGGCC GTAGCTCCTT CGACGTGCTG
CCCGTTGATA ACAAGGGTGA AGCTCGCGAC GAATACACCA AGGTCGGCGG CGCAGCCAAA
GTCCGCTTGT TCGATACCAT CGTGAAAGTG GGTGATGTCT TCCCATCGAC CCCGGTCGTC
GCATCGGGTG ACTCTCGCCT GCTGCCAGAG AGTTTCCGCG GTGTGACCGT TGAGAACACC
AGCATCCAGG GCCTTACCCT CCAGGGTGGT CGTCTGCATG CGATGAGCCA GCCGGTCTCA
AGCAACCTGA ACGACAACTT CGTGACGTTC TACGGCGGCC CGGTCAACTC GCCATGGATC
GGTTACGGTG GCGGTGACTA CTCGATCAAC GACAACTGGA CTGTGAGCGT CTACGCCAGC
CAGCTGAAAG ACGTCTGGAA TCAGTACTAC GCCGGCACAA GCGTGGTTTA CCCGCTGAGC
GACGATCTGG CGCTGATCGG TGGCTTCAAC TACTACAAAG CCGTAGATGA AGGTAAGAAG
CGCCTGGGTG AATTCGACAA CAACATCTGG AGTGCCAAGG TCGGTGTGCG TTACGGTGCC
CACACCCTGG CCCTGTCGCA TCAGCGCAAC AACGGCGACG ACGATTTCGA CTACCTGCGT
CAGTCGGACT CGATTTTCGT CGACAACTCC ATCCAGTACA GCGACTTCAA CTCGCCGAAA
GAGCGTTCCT GGATGCTGCG CTATGACCTG AACTTCACCA GCTACGGCAT TCCAGGCCTG
ACGTTCATGA CGCGCTACGC CAGAGGCTCG GGTGCGGATT ACTCGAACGC TAACCAGTTC
TACATGCGCA CCGACGACAA CGGCAACCCG CTCGACAATC AGAAGCGTTG GGAGCGTGAC
GTCGAAGTCA AATACGTTGT CCAAACCGGT CCGGCAAAAG ATCTGTCCTT CCGGTTGCGC
CAGGCAACCA CGCGTGCCAC TGCTTTCGAA TCGGATCTGG ATGAAACTCG TGTAATCATC
GAGTACCCGC TTTCGATTCT GTAA
 
Protein sequence
MKIKVPLYLA AVSALSGSYA ISAQAEDKPE GFIEGSSLTV LNRNFYFNRD NRDSTAPTYN 
SGKGNTNGYS EAWAHAIISK FNSGFTQGTV GFGVDAFAMI GLKLDTGDGR NGGRSSFDVL
PVDNKGEARD EYTKVGGAAK VRLFDTIVKV GDVFPSTPVV ASGDSRLLPE SFRGVTVENT
SIQGLTLQGG RLHAMSQPVS SNLNDNFVTF YGGPVNSPWI GYGGGDYSIN DNWTVSVYAS
QLKDVWNQYY AGTSVVYPLS DDLALIGGFN YYKAVDEGKK RLGEFDNNIW SAKVGVRYGA
HTLALSHQRN NGDDDFDYLR QSDSIFVDNS IQYSDFNSPK ERSWMLRYDL NFTSYGIPGL
TFMTRYARGS GADYSNANQF YMRTDDNGNP LDNQKRWERD VEVKYVVQTG PAKDLSFRLR
QATTRATAFE SDLDETRVII EYPLSIL