Gene PP_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0036 
Symbol 
ID1043516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp39272 
End bp40240 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content52% 
IMG OID637143408 
ProductLysR family transcriptional regulator 
Protein accessionNP_742206 
Protein GI26986781 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000369238 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTACAC AAAATGAAAC ATATACAAGC ACCGTTGTTC CTTACAGCCC TGACATATTG 
GATGATTTGC CAATTGATGA TCAGCTGGCC GTAGAGTTTT TCGCAACAGC ACGTTGTGCC
AGTTTCAAAC AGGCTGCCCG AGGGCTCAAT GTGCCAGTGG TAGGCCTGCG GAAACGCTTG
GAGAAACTGG AAGAGCACAT TGGTGCTCCC GTGTTTGTCT ACAAACACAA CAAGCTTGCC
CTGACCCGCA CAGGCGAGAG GGTCAGCCAT TACCTGTGCC AGCTCTTCGG CCCAGACGGC
CTTGGCAAGT CCGGTGAAAA GGAAGTCCCC AGGCTTACCA TCGCGATCAC AGAGCCAGTG
CTGAACGACA TCGTAAACCG CGATCTAGTC GCCTACGTGC GTGATCATGC CGAAATGCAG
CTGGAAATCC ATTCAGAATG CACAACGCAG ATGCTTTCTG AGTGTGAAGT CGATGTGGGT
ATCGCTTTGG TGAGCCCAGA TGATAAAGGC GCGCTTGATC GCCATCCTAC GTATAGGTTT
GAACGGCTTG GCCGGATTGG GCACGCCCTG TTCATTTCCA GCCGCTATTC AAGAAGCGTC
ACCCTTCCAG TGGAGAGCTT GGATTTGCAC AACTTCATGC TCGTTGTCCC TTGGGATGAA
GAGATCTTGG CGGGCTCACG AAAGTGGGCA TCGATAATGG CTGAGCATCA GGGCGGTACC
ACTCGGGTCA AGAGCTACAA CCTATCACGA GGCCTTGTCG TTGGCGGTGC GTGTATTGGA
GTGCTGCCCG ACTACAGCCG AAAACTGGAG AGAAATATCC TACCCGTGCC GGGTTTCCTG
GACGACCTGG AGGAGAAAGA TGTCTATCTT GTTATCAAAA CGAAGCTTGT CCGCAATCCG
CAGGTTTTGG AAATTCGAAG ATTGATCAAG AAGAGCTTCT TTGATAAGAA GGACTGGCTT
GTTCGGTAA
 
Protein sequence
MVTQNETYTS TVVPYSPDIL DDLPIDDQLA VEFFATARCA SFKQAARGLN VPVVGLRKRL 
EKLEEHIGAP VFVYKHNKLA LTRTGERVSH YLCQLFGPDG LGKSGEKEVP RLTIAITEPV
LNDIVNRDLV AYVRDHAEMQ LEIHSECTTQ MLSECEVDVG IALVSPDDKG ALDRHPTYRF
ERLGRIGHAL FISSRYSRSV TLPVESLDLH NFMLVVPWDE EILAGSRKWA SIMAEHQGGT
TRVKSYNLSR GLVVGGACIG VLPDYSRKLE RNILPVPGFL DDLEEKDVYL VIKTKLVRNP
QVLEIRRLIK KSFFDKKDWL VR