| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0031 |
|---|
| Symbol | |
|---|
| ID | 1043510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 35040 |
|---|
| End bp | 35627 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637143403 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_742201 |
|---|
| Protein GI | 26986776 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000390702 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA TAGAGCCCTG GGCAGTTGCT ATCGGTGACT TTCGCCGCTG CACTGAAAAA
CTCACTGTCC AGCTCGATGA GCTGACCTCG CAGACGCGCA CCTCCAGCGC TGTTCTGGAG
AGGTCGAACG AACTGGTGGA GCAGGTGGAC GCTGTCGGCC GGCAGATTCA GGAGGAGGTG
CGAAAGGCGG AGAAGGCTTG GTCGAACGCG GAGGAGGTTG CCTTGCGCGC CGCTGCATCA
GCGTATTCAG CTGCATGCCG CGGAGTCGAC ACCGCCATCC AGCCACTGAT CTCGGAGCTT
ACAGCAGCGA CAAAGGCGGC GGACGCCTCT ATCCAGGAGC TCAAGCGGGC ACCGGTGCTG
GCCAAGCGTT ATGTGATGGT GGTCGCCACG GCGTTCTTCA TTCTGGCGCT GATCTGTGTC
TACTCGACCA TGCGCCTGAT CGATGCCGCC GGCAGCGTAA GTGCTCAAGA GAAAGTGAAT
GCTCAGTACT TCTCACACCT GTGGAAAAAC GCCAATCCTG ACGAACAGAA GATTATTAAG
TCGGTGATTC TGCGGTCGCC CATGGACCCT GTGGTCCTTC GGCACTGA
|
|---|
| Protein sequence | MNDIEPWAVA IGDFRRCTEK LTVQLDELTS QTRTSSAVLE RSNELVEQVD AVGRQIQEEV
RKAEKAWSNA EEVALRAAAS AYSAACRGVD TAIQPLISEL TAATKAADAS IQELKRAPVL
AKRYVMVVAT AFFILALICV YSTMRLIDAA GSVSAQEKVN AQYFSHLWKN ANPDEQKIIK
SVILRSPMDP VVLRH
|
|---|
| |