Gene PP_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0024 
Symbol 
ID1043503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp27850 
End bp29547 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content55% 
IMG OID637143396 
Producthypothetical protein 
Protein accessionNP_742194 
Protein GI26986769 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.76677e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACCTT CCAAATCCAT TGTTCACACC CTGTTAAGCA AATGGATCTT TGCTATTCGC 
AATGCGCGGC AGAAAGGCAT CAGTACTAAT TTGCTAATCG GCCTGGTGAC TTTTTGGTTA
CTGCTATTCG CGAACGCTGA GCTCTGGAAC GTGCTCTGGA AGCTGGTATT CAAAACCGAT
GAAGTGAACT GGCAGCTAGC GGCTAGCCTC CCAGTCATAG TATTCGCATG GGTGTTTACC
GTTCTGAGCT TGCTGTCATG GGGGCGGCTG GCCAAACCCA TACTGTGCCT GGTACTGATC
AGCGCGTCTT TTGCGAGTTA CTTCATGAAT GCCTACGGCA TCGTGATCGA TTACACAATG
TTCACCAACG TTGTGGAGAC CGACGTCGCT GAGGCAACCG AGCTGCTGAA TTGGAAGCTC
GGTCTTTGGG TCGCAATGGT TGGGGTGTTG CCCGTCTACC TGATTGCCCG GGTTCCCCTC
CGGCGCAAGC CTTGGGCCAA AGCTTTGGTC AGCAGGTTCA TTGCTCTGTC GCTCGCTCTG
TTGACCTTAT CTGGCATCGC GTTGAGTCAG TACCAGTCGT ATGCCTCCTT GCTGCGCAAC
AATCGGGAGA TCCGGCTGAT TCTGGTACCT ACCAACTTGT TTGCGGCTGG CCATGGGTAC
CTGAAGCGTC AGCTGGCCTC ACCTAAAACG CTGACGGCCA TTGGTACTGA TGCGGTAGTT
AATCGACAGG GTGCGGCTCG TAAACCCAGG CTGCTGGTAC TGGCAGTAGG AGAGACCGCT
CGCTCCGCCA ACTTCTCCCT CAACGGCTAC TCCCGTGAAA CGAATCCGGA ACTAGAAAAG
CGAAATGTCA TTAGCTTCAC GAACGTGAGC TCCTGCGGTA CCGCTACCGC GGTCTCGCTG
CCATGCATGT TCCTGGACGT GGGTAAGGCC CAGTACAAAG ATGGCTTGGC CAAGAGCCGA
GAAGGGCTGC TCGACGTGCT TCAACGCGCT GGCATCAGTG TCATGTGGAC TGACAACAAC
TCGGGGTGCA AAGGGGTCTG CGACAGGGTT CCCAACCACA AGGCTGCCTC TCACGCGGAT
TCCCAACTGT GCACCAGCGA GGAGTGTAAG GACGGGGTGC TGCTCACGGA GATGCAAGAC
TTCATCAAGC GCCAGGAAGG CGATGCTGTC CTGGTGCTCC ACTACAAAGG CAGTCACGGC
CCGGCCTACT ACAAGCGCTA CCCCTCGCAA TTCAAGAAAT TCGCACCGGT GTGCGAGACC
AACGAGCTCG ACAAATGTAA GCAGGAGGAG GTGGTCAATG CCTACGACAA CTCAATCCTC
TACACCGATT ATGTGACTGC AAATCTCATC GATATCCTGG CGGCCAACAC CAAGTTCGAC
ACTGCGCTGA TGTACGTTTC GGACCACGGC GAATCGCTGG GGGAGGGTGG GCTCTATCTA
CACGGGCTGC CTTACGCGAT GGCTCCTGAC GAGCAAACAA AGGTGCCGTT GGTACTTTGG
ATGTCTGACT CGCTCGCGAA GAGCGAAAAG GTCAACGTGG GTTGTTTGAA AGCTCAAACC
ACGTCACCGC TGAGCCACGA CAACCTGTTC CACACCGTGC TCGGCATGAT GAACGTCCAG
ACGTCTTCGT ATCGCTCAGC GCTGGATTTC ACTGCCCCTT GTAAGCCCTT TGTCGGAGGC
TCTTATTCTG GCCTCTGA
 
Protein sequence
MTPSKSIVHT LLSKWIFAIR NARQKGISTN LLIGLVTFWL LLFANAELWN VLWKLVFKTD 
EVNWQLAASL PVIVFAWVFT VLSLLSWGRL AKPILCLVLI SASFASYFMN AYGIVIDYTM
FTNVVETDVA EATELLNWKL GLWVAMVGVL PVYLIARVPL RRKPWAKALV SRFIALSLAL
LTLSGIALSQ YQSYASLLRN NREIRLILVP TNLFAAGHGY LKRQLASPKT LTAIGTDAVV
NRQGAARKPR LLVLAVGETA RSANFSLNGY SRETNPELEK RNVISFTNVS SCGTATAVSL
PCMFLDVGKA QYKDGLAKSR EGLLDVLQRA GISVMWTDNN SGCKGVCDRV PNHKAASHAD
SQLCTSEECK DGVLLTEMQD FIKRQEGDAV LVLHYKGSHG PAYYKRYPSQ FKKFAPVCET
NELDKCKQEE VVNAYDNSIL YTDYVTANLI DILAANTKFD TALMYVSDHG ESLGEGGLYL
HGLPYAMAPD EQTKVPLVLW MSDSLAKSEK VNVGCLKAQT TSPLSHDNLF HTVLGMMNVQ
TSSYRSALDF TAPCKPFVGG SYSGL