| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0010 |
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| Symbol | dnaA |
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| ID | 1043486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 9542 |
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| End bp | 11062 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637143382 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | NP_742180 |
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| Protein GI | 26986755 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.645293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000364152 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCAGTGG AACTTTGGCA GCAGTGCGTG GAGCTTCTGC GCGATGAACT GCCTGCCCAG
CAATTCAACA CCTGGATCCG TCCGCTACAG GTCGAAGCCG AAGGCGACGA GTTGCGCGTC
TATGCGCCTA ACCGTTTCGT TCTCGATTGG GTCAATGAAA AGTACCTGGG TCGCTTGCTC
GAGCTGTTGG GTGAGAACGG TAGCGGCATT GCACCAGCCC TTTCCTTATT AATAGGTAGC
CGTCGCAGCT CGGCCCCAAG GGCTGCGCCC AACGCGCCGG TCAGCGCTGC CGTTGCGGCT
TCGCTGGCGC AGACTCAGGC ACACAAGACG GCCCCGGCAG CAGCGGTTGA ACCCGTTGCC
GTGGCTGCAG CCGAGCCTGT ACTGGTCGAG ACGTCTTCGC GTGACAGCTT TGATGCCATG
GCCGAGCCCG CTGCGGCGCC GCCCAGTGGT GGTGGCCGGG CTGAACAACG CACCGTGCAG
GTTGAAGGTG CGCTCAAGCA CACCAGTTAC CTGAACCGGA CCTTTACCTT TGACACCTTC
GTCGAAGGTA AGTCGAACCA GCTCGCCCGC GCGGCTGCCT GGCAGGTTGC GGACAACCCT
AAGCATGGCT ACAACCCACT GTTCCTTTAT GGTGGTGTGG GTTTGGGTAA AACCCACCTT
ATGCATGCTG TGGGTAACCA TCTGCTGAAG AAAAATCCGA ACGCCAAGGT GGTGTACCTG
CATTCGGAGC GTTTCGTCGC GGACATGGTC AAAGCGCTGC AACTCAATGC CATCAACGAA
TTCAAGCGCT TCTACCGCTC GGTGGATGCT TTGCTGATCG ACGATATCCA GTTCTTCGCT
CGCAAAGAGC GCTCGCAAGA AGAGTTTTTC CACACCTTCA ACGCCTTGCT CGAGGGTGGC
CAGCAGGTAA TCCTTACCTC TGACCGCTAT CCCAAGGAAA TCGAAGGCCT GGAAGAGCGT
CTGAAGTCGC GCTTTGGTTG GGGCCTGACG GTGGCTGTCG AGCCACCAGA GCTAGAGACC
CGCGTAGCGA TCCTGATGAA GAAGGCCGAC CAGGCCAAAG TCGAGCTCCC GCATGACGCA
GCCTTTTTCA TCGCTCAGCG CATCCGGTCC AACGTCCGTG AGCTGGAAGG TGCACTGAAG
CGGGTTATCG CTCACTCGCA CTTCATGGGG CGTGACATCA CCATCGAGCT GATTCGTGAA
TCGCTCAAGG ATCTGTTGGC GCTGCAAGAC AAACTGGTCA GTGTGGATAA CATTCAGCGT
ACCGTCGCTG AGTACTACAA GATCAAGATC TCCGATCTGT TGTCCAAGCG TCGTTCGCGT
TCTGTCGCGC GCCCGCGTCA GGTAGCCATG GCCCTGTCCA AGGAGTTGAC CAACCACAGT
CTGCCGGAAA TCGGCGACAT GTTCGGTGGT CGCGACCATA CGACCGTGCT GCACGCCTGC
CGCAAAATCA ATGAACTGAA GGAATCCGAC GCGGACATCC GCGAGGACTA CAAGAACCTG
CTGCGGACGC TGACGACCTG A
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| Protein sequence | MSVELWQQCV ELLRDELPAQ QFNTWIRPLQ VEAEGDELRV YAPNRFVLDW VNEKYLGRLL
ELLGENGSGI APALSLLIGS RRSSAPRAAP NAPVSAAVAA SLAQTQAHKT APAAAVEPVA
VAAAEPVLVE TSSRDSFDAM AEPAAAPPSG GGRAEQRTVQ VEGALKHTSY LNRTFTFDTF
VEGKSNQLAR AAAWQVADNP KHGYNPLFLY GGVGLGKTHL MHAVGNHLLK KNPNAKVVYL
HSERFVADMV KALQLNAINE FKRFYRSVDA LLIDDIQFFA RKERSQEEFF HTFNALLEGG
QQVILTSDRY PKEIEGLEER LKSRFGWGLT VAVEPPELET RVAILMKKAD QAKVELPHDA
AFFIAQRIRS NVRELEGALK RVIAHSHFMG RDITIELIRE SLKDLLALQD KLVSVDNIQR
TVAEYYKIKI SDLLSKRRSR SVARPRQVAM ALSKELTNHS LPEIGDMFGG RDHTTVLHAC
RKINELKESD ADIREDYKNL LRTLTT
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