Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0001 |
Symbol | parB |
ID | 1043468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 147 |
End bp | 1019 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143373 |
Product | parB-like partition protein |
Protein accession | NP_742171 |
Protein GI | 26986746 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000184934 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGTCA AGAAACGGGG TCTCGGACGT GGGTTGGATG CACTGCTCAG TGGTCCTTCC GTCAGCGCGC TCGAAGAGCA GGCTGTGAAG ATCGACCAGA AAGAACTGCA ACACCTGCCG GTCGAGCTGG TCCAGCGCGG CAAGTATCAG CCTCGCCGGG ACATGGACCC GGAGGCGCTG GAAGAGCTTG CGCACTCGAT TCGCAACCAT GGTGTGATGC AACCGATCGT GGTACGCCCG ATTGGCGACA ACCGATACGA GATCATCGCC GGTGAGCGCC GTTGGCGCGC TACCCAGCAG GCCGGCCTGG ACACGATCCC GGCCATGGTC CGCGAAGTGC CCGACGAAGC CGCCATCGCC ATGGCATTGA TCGAGAACAT CCAGCGCGAA GACCTCAACC CACTGGAAGA GGCCATGGCC CTGCAGCGCC TGCAACAGGA ATTCGAACTC ACCCAGCAGC AGGTGGCTGA CGCTGTGGGC AAGTCGCGGG TGACTGTGGC CAACCTGCTG CGCCTCATCA CCTTGCCCGA TGCGATCAAG ACCATGCTCG CCCACGGTGA TCTGGAGATG GGGCACGCCC GTGCATTGCT GGGCCTGGAC GAAAATCGTC AGGAGGAGGG GGCGCGTCAT GTTGTCGCAC GTGGCCTCAC CGTGCGCCAA ACCGAGGCAC TGGTCCGTCA GTGGCTCAGC GACAAGCCTG ATCCGGTCGA ACCGAGCAAA CCTGATCCGG ATATCGCACG CCTTGAACAG CGGCTCGCAG AGCGCCTGGG CTCGGCCGTG CAGATCCGTC ATGGCAACAA GGGCAAAGGC CAGTTGGTTA TTCGCTACAA CTCGCTTGAC GAGTTGCAAG GCGTGCTCGC TCACATCCGC TGA
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Protein sequence | MAVKKRGLGR GLDALLSGPS VSALEEQAVK IDQKELQHLP VELVQRGKYQ PRRDMDPEAL EELAHSIRNH GVMQPIVVRP IGDNRYEIIA GERRWRATQQ AGLDTIPAMV REVPDEAAIA MALIENIQRE DLNPLEEAMA LQRLQQEFEL TQQQVADAVG KSRVTVANLL RLITLPDAIK TMLAHGDLEM GHARALLGLD ENRQEEGARH VVARGLTVRQ TEALVRQWLS DKPDPVEPSK PDPDIARLEQ RLAERLGSAV QIRHGNKGKG QLVIRYNSLD ELQGVLAHIR
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