Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3453 |
Symbol | hemE |
ID | 2688126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3800181 |
End bp | 3801203 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637128148 |
Product | uroporphyrinogen decarboxylase |
Protein accession | NP_954493 |
Protein GI | 39998542 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0575742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATC GTTTTCTCGA CGCCTGCTGG GGCAAGCCCG TTGACCGTAC TCCCGTGTGG CTCATGCGCC AGGCGGGCCG CTATCTCCCC GAATATATGG CAGTACGCTC CAAGTGCACC TTCCTGGAAC TCTGCAAGAC CCCGGAACTG GCGGCAGAGG TGACCATTCA GCCCATCGAC ATTCTGAATG TCGACGCGGC GATCCTCTTC TCCGACATCC TCACTCCGGT TGAGCCCATG GGGCTCAAGC TCGACTTCGT GCCCGGCCCG GTCTTCGAGC ACCCCGTACG TACCATGGCC GATGTGGAGA AGCTGCGCAT TCCCAACCCC GAGGAAGATG TCCCCTACGT ACTGGACACC ATCAAGATCC TCCGTCGGGA ACTGGCCGGC AGGGTTCCCC TGATCGGCTT CGGCGGAGCG CCGTTCACCC TGGCCTGCTA CATGGTTGAA GGCAAGGGTT CCAAGGACTG GGCAAACATC AAGCGGATGA TGTATGCCGC TCCCGACGTC TATGCCGCCC TCATGGACAA GGTTACCATG ATGGACATGG AGTACCTGAA CGCCCAGATC AAGGCCGGTG CCCAGGCGAT CCAGATCTTC GACACCTGGG GCGGGGTCCT CTCCCCCACC GATTACGAGA AGTACGTTCT GCCCTACACC ACCAAGCTCA TCAACGGCCT GAACCGTCAG AACACGCCGG TGATCCACTT TGTCAAGGGC GCCGGCACCA TGCTGGAGAC GGTGCAGAAG GCCGGCGGCG ACGTCATGGG GCTCGACTGG CACGTGAATC TTGGGAAGGC CAGGGACGTG CTCGGTCAGA ACATGGCCGT GCAGGGGAAC CTGGACCCCA CGGTCCTCTA CGCCCCCAAA GAGGTCATCG AGGCCGAGGT GAAGCGGGTG CTCGACGAGA ATGCCGGCCG TCCCGGACAC ATCTTCAACC TGGGACACGG CATCCTGCCG ACAGTGCCGC CGGAAAACGC CATCCACATG GTGGAGTGCG TGCACCGGCT GTCCCAGAAG TAG
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Protein sequence | MNNRFLDACW GKPVDRTPVW LMRQAGRYLP EYMAVRSKCT FLELCKTPEL AAEVTIQPID ILNVDAAILF SDILTPVEPM GLKLDFVPGP VFEHPVRTMA DVEKLRIPNP EEDVPYVLDT IKILRRELAG RVPLIGFGGA PFTLACYMVE GKGSKDWANI KRMMYAAPDV YAALMDKVTM MDMEYLNAQI KAGAQAIQIF DTWGGVLSPT DYEKYVLPYT TKLINGLNRQ NTPVIHFVKG AGTMLETVQK AGGDVMGLDW HVNLGKARDV LGQNMAVQGN LDPTVLYAPK EVIEAEVKRV LDENAGRPGH IFNLGHGILP TVPPENAIHM VECVHRLSQK
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