Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3398 |
Symbol | |
ID | 2686272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3737064 |
End bp | 3738368 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637128093 |
Product | metal ion efflux outer membrane protein family protein, putative |
Protein accession | NP_954438 |
Protein GI | 39998487 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01635] phage virion morphogenesis (putative tail completion) protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCGAG CAGTTTCCCT GCCGGTGGCG GCCTTGTTGT TTCTTGCCGT CACCGGTGCG TCGGCGGGCA ATGCCGGCGC CGACACCAGA ATCTTCACCC TTACCGAGGC CGTTGAGCAC GCTCTCAGCA ACAACGGTGA GCTCAAGGCG GCGCGGAGCG GACACGAGGC CGCCCAAGCC GGCACCGTCC GGGCCGGGCT TTACCCCAAT CCGGTCCTGG AGCTGGAAGG AGCCACCGGT GCCCTCACCG GCAGCAGCAA CGAAAACAGC ATGGAACTGG CAATTTCCCA GGAAGTGCTG CTTGGCGGCA AGCGGGCCAA ACGACTGGAA GCCGCGGAGC GGGACGTCGA GGCGGTCCGC TGGTGGTTGG CGGATCGGGA ACGTCTCACT GCCCTGGAAG TGAAGACGGC GTATGCCGAT CTTCTGCTGG CCCAGCAACG GGTCGATCTG GCAAAGCAGG CCGCGGAGCT GGGCAGCCGC CTGCTGACCC TGACGCAGGA GCGTTTCGCT GCGGGCGACA TTCCTGAGCT GGAGGTCAAC CTGGCCCGGG TCGAGGCGGC GCGCAGCGAC AGCGAGCGGA TGGCGGCGGA ACGGGAGATC GTGCCGGTCC GCTCTCGGCT CTCAACCCTC ATGGGTCTTG ACCCCGGCAC TGAGGCGGCC GTTGTTGCGC CGCCCGACGA ACAGCCCGTT ACCGCCCTGG TTGCCGGCCT GGCAACCAAG GCCCGGGAAC ACCGTCCCGA CCTCAAGGCA CTGACCGCCG AACAGGCCAG GGGCGAGGTA GAGGTGAGCC TTGCCCGGTC CGAGGGGGTA CCGAACCTGA CAGTGGGACT CTTCGTGGCC CATGAGCGGA GCACCGACGC CATCGGCACC GACGAGGAAA AAACCCGTGA CACCATCGTG GGGGTAAGGC TCTCCCTGCC GCTCCCCCTC TTTGATCGCA ACCAGGCCGG CATCCGCGAG GCCGGTGCCC GCCGCGGGGG AACCGAGGCC CGGCTCATCG CCGCCCGCAC CGCGCTGGAG CGGGAGGTGG CGGCGGAGTA TGCCCGAATG GCCGCAGCGG AGGAGGTCCT CCGCCTCTAC GCGAAGGATA TCCTTCCACG GCTCAAGGAG AACCTCGCCC TGGTTCAGGA GGCCTACGGA CTGGGGGAAA TAGACATTCT CGCGGTTATC GAGGAGCAGA AAAAATACGT GGCGGTCCAC GGGTCATACC TGGCGGCCGT CCATGCCCGG CAGACGGCCC GTGCCCGCCT GGAGGCAGCC GTGGGCGCGC CCCTTGACGA ACTGACAACA GGAGGTACCC AGTGA
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Protein sequence | MNRAVSLPVA ALLFLAVTGA SAGNAGADTR IFTLTEAVEH ALSNNGELKA ARSGHEAAQA GTVRAGLYPN PVLELEGATG ALTGSSNENS MELAISQEVL LGGKRAKRLE AAERDVEAVR WWLADRERLT ALEVKTAYAD LLLAQQRVDL AKQAAELGSR LLTLTQERFA AGDIPELEVN LARVEAARSD SERMAAEREI VPVRSRLSTL MGLDPGTEAA VVAPPDEQPV TALVAGLATK AREHRPDLKA LTAEQARGEV EVSLARSEGV PNLTVGLFVA HERSTDAIGT DEEKTRDTIV GVRLSLPLPL FDRNQAGIRE AGARRGGTEA RLIAARTALE REVAAEYARM AAAEEVLRLY AKDILPRLKE NLALVQEAYG LGEIDILAVI EEQKKYVAVH GSYLAAVHAR QTARARLEAA VGAPLDELTT GGTQ
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