| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3395 |
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| Symbol | putA |
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| ID | 2686279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3732461 |
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| End bp | 3735475 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637128090 |
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| Product | proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | NP_954435 |
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| Protein GI | 39998484 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAACA GTGAGCTGAA CACGAAGATC GTTAACCGCG GCAAGGAGTT TTTCGGCAGC
ATTTCCGGCG AGAAGCCCTC CCTCTTCAAC AAGGGGGCCT GGATGGGCAA GGCCATGGAC
TGGAGCATGC AGAACGAGCA GTTCAAGATC CAGATGTTCC GGTTTGTGGA CGTGTTCCCC
TCGCTGACCA CCAGTAAGCT CCTGACGGAG CATATTCGCG AATATTTCGG CAACGAGCAG
GATATGCCCG CGTTCATGTC CACGGGGGCC AAGGTGGCGG GGATGCTCGG TTCCTTCGGC
GGGGCCGTGC TGAACAAGGT GCTCACCTCC AATATCGAGG AGATGGCCCG CCAGTTCATC
GTGGGCGAGA CCACCAAGGA GGCGGTGAAA AACCTGGAGA AGCTCCGCAA GGACGGCTTC
GCCGCGGTGG TTGACGTGCT CGGCGAGGCG ACCCTTTCCG AAGAGGAAGC AGAAGTCTAC
ACGAACACCT ACCTGGAGCT GCTGGAGGCC CTGAAGAAAG AGCAGGGGAG CTGGAAAGGC
CTGCCCGGCA AGGGAGGCGA CCCTGGCTTG GACTGGGGGC ATGCCCCCAA GGTGAACATT
GCGGTGAAGC CCACGGCCCT CTTCTGCCTG GCCAATCCCC AGGACTTCGA GGGGTCGGTG
GTGGCCATCC TTGACCGGAT GCGCCGCATC TTCAAGAAGG TAATGGAGCT GAATGGCTTC
CTCTGCATCG ATATGGAATC GTACCGCCAC AAGGAGATCA TCCTGGAGGT CTTCCGGCGC
CTGAAACTGG AGTACCGCGA CTATCCCCAC CTGGGAATCG TGCTCCAGGC TTACCTGAAG
GATAACGACA AGGACCTGGA TGACCTTCTG GCCTGGGCGA AGGAGCACAA GGTTCAGATA
TCCGTCCGTC TCGTGAAGGG TGCCTACTGG GACTACGAAA CGGTCAAGGC GAAGCAGAAC
GATTGGGAAG TCCCGGTCTG GACCATCAAG GCGGAGAGCG ACGCGGCCTA CGAGCGCCAG
GCGCGGAAGA TCCTGGAAAA CCACCAGATC TGCCACTTTG CCTGCGCCTC CCACAATATC
CGGACCATAT CGGCGGTCAT GGAGATGGCG CGGGAACTGA ATGTGCCGGA GGATCGTTAT
GAATTCCAGG TTCTCTACGG CATGGCCGAA CCGGTGCGCA AGGGGATTCT GAAGGTGGCG
GGACGCATCC GCCTCTATGC ACCCTACGGC AACATGGTTC CGGGGATGGG GTACCTGGTG
CGTCGGCTCC TGGAGAACAC CGCCAATGAA TCGTTCCTGC GCCAGAGCTT TGCCGAGGAC
GCCCAGATCG AGCGCCTGCT GGAAGACCCG GCTGTCACGG TCGAGCGGGA ACGGGCCGCC
CGCGCCGCAA AGCCGAAGAA GGAGCGGAAA GGCCTCGGCG GGCTTCCCCC GTTCAACAAC
GAGGCCATGG TGGACTTCAC CCGGGCTGAT CACCGGGCTG CCTTCCCGAA GCACATCGCC
CAGGTGCGGA CCCAGTTGGG CAAGACCTAT CCCCTGTTCA TAAACGGGAA AGAGGTCCGG
ACCAACGACC TCATCCCCAC CGTGAACCCC AACAAGCCCT CTGAGGTCCT GGGCCAGATC
TGCCAGGCAG GCACCACGGA GGTGGGCGAC GCCATCGCTG CCGCCAAGGC AGCCTTCCCG
GCATGGCGCG ACACCGATCC CCGGACCAGG GCCGAATATC TCCTGAAGGC GGCCCAGGCC
GCCCGCAAGC GACTCTTCGA ACTCTCGGCC TGGCAGGTCC TGGAGATCGG CAAGCAGTGG
GATCAGGCCT ATGCCGACGT GACCGAGGCC ATCGACTTCC TGGAATACTA TGCCCGTGAG
ATGATCCGGC TGGGCCAGCC CCAGCGGGTG GGCCACGCCC CGGGCGAACT GAACCATTAC
TTCTACGAGC CCAAAGGGGT GGCCGCGGTC ATCGCACCCT GGAACTTCCC CCTGGCCATC
AGCATGGGCA TGGCGTCGGC AGCCATCGTC ACCGGCAACT GCGTGGTCTT CAAGCCGTCG
GGGATCACCT CGATCATCGG CTGGCACTTG GTGGAGCTGT TCCGCGAGGC GGGCCTCCCC
GAAGGGGTCT TTAACTTCAC GCCGGGTCGC GGCTCGGTCA TGGGCGACTA CCTGGTGGAT
CACCCGGACA TCAGCCTGAT CGCCTTCACC GGCTCCATGG AGACCGGCCT GCGGATCATC
GAGCGTGCCG CCAAGGTCCA TCCGGGCCAG GCCAACGTGA AGAAGATCAT CTCCGAGATG
GGCGGCAAGA ACGCCATTAT CATCGACGAC GACGCCGACC TCGACGAGGC GGTGCCCCAT
GTCCTCTACT CGGCCTTCGG CTTCCAGGGG CAGAAATGCT CCGCCTGTTC CCGGGTCATC
GTGCTGGATG CAGTTTATGA TAAATTCATC GAGCGGCTCG TTTCCATGGC CAAGGCCACC
AAGGTGGGCC CCTCCGAGGA TCCGGCCAAC TACATGGGTG CCGTGGCCGA CGACAAGGCC
ATGAAGAGCA TCAAGGAGTA CGCGGAGATC GGCAAGCGGG AAGGGCATGT TCTCTATGAG
AGCCCGGTGC CGGCCGGTGA GGGGTATTTC GTCCCCATGA CCATCATTGG CGGCATAAAG
CCCGAGCACC GTATCGCCCA GGAGGAGATC TTCGGACCGG TTCTTGCGGT TATGCGGGCC
AAGGACTTCG ACCAGGCCAT CGAATGGGCC AACTCCACGC AGTTTGCCCT CACCGGCGGT
ATCTTCAGCC GCAGCCCCGA ACACCTGGCC AAGGCCCGCC GGGAGTTCCG GGTGGGGAAC
CTCTACATCA ACCGGAACAA CACCGGTGCC TTGGTGGAGC GGCAGCCCTT CGGCGGCGCC
CGCATGTCCG GGGTCGGCAC CAAGGCCGGC GGTCCCGACT ACCTCCTCCA CTTCATGGAC
CCGCGGGTGG TCACTGAGAA CACCATGCGG CGCGGTTTCG CTCCTATCGA GGAGGACGAC
GACTGGGTCG ATTAG
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| Protein sequence | MLNSELNTKI VNRGKEFFGS ISGEKPSLFN KGAWMGKAMD WSMQNEQFKI QMFRFVDVFP
SLTTSKLLTE HIREYFGNEQ DMPAFMSTGA KVAGMLGSFG GAVLNKVLTS NIEEMARQFI
VGETTKEAVK NLEKLRKDGF AAVVDVLGEA TLSEEEAEVY TNTYLELLEA LKKEQGSWKG
LPGKGGDPGL DWGHAPKVNI AVKPTALFCL ANPQDFEGSV VAILDRMRRI FKKVMELNGF
LCIDMESYRH KEIILEVFRR LKLEYRDYPH LGIVLQAYLK DNDKDLDDLL AWAKEHKVQI
SVRLVKGAYW DYETVKAKQN DWEVPVWTIK AESDAAYERQ ARKILENHQI CHFACASHNI
RTISAVMEMA RELNVPEDRY EFQVLYGMAE PVRKGILKVA GRIRLYAPYG NMVPGMGYLV
RRLLENTANE SFLRQSFAED AQIERLLEDP AVTVERERAA RAAKPKKERK GLGGLPPFNN
EAMVDFTRAD HRAAFPKHIA QVRTQLGKTY PLFINGKEVR TNDLIPTVNP NKPSEVLGQI
CQAGTTEVGD AIAAAKAAFP AWRDTDPRTR AEYLLKAAQA ARKRLFELSA WQVLEIGKQW
DQAYADVTEA IDFLEYYARE MIRLGQPQRV GHAPGELNHY FYEPKGVAAV IAPWNFPLAI
SMGMASAAIV TGNCVVFKPS GITSIIGWHL VELFREAGLP EGVFNFTPGR GSVMGDYLVD
HPDISLIAFT GSMETGLRII ERAAKVHPGQ ANVKKIISEM GGKNAIIIDD DADLDEAVPH
VLYSAFGFQG QKCSACSRVI VLDAVYDKFI ERLVSMAKAT KVGPSEDPAN YMGAVADDKA
MKSIKEYAEI GKREGHVLYE SPVPAGEGYF VPMTIIGGIK PEHRIAQEEI FGPVLAVMRA
KDFDQAIEWA NSTQFALTGG IFSRSPEHLA KARREFRVGN LYINRNNTGA LVERQPFGGA
RMSGVGTKAG GPDYLLHFMD PRVVTENTMR RGFAPIEEDD DWVD
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