| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3376 |
|---|
| Symbol | |
|---|
| ID | 2686891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3710034 |
|---|
| End bp | 3710960 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637128070 |
|---|
| Product | GGDEF/response regulator receiver domain-containing protein |
|---|
| Protein accession | NP_954416 |
|---|
| Protein GI | 39998465 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGA CAGCCCTCGT AATCGACGAT TCGGAAGTCC TGCGCGAGGA AATAGTGCGC
ACCCTCAAGG AGGCCCGGCT ATTCGAGACG TATCTGGAAG CCCGGGACGG CCTCGAAGGA
TTCAAGACGC TCCTCAACAA CAAGGTGGAC CTGGTGCTCT GCGACCTGGA GATGCCGCGC
ATGGACGGGT TCCGTTTCCT GTCCATGACC CGGTCCCGGG GTGAGCTCCA GGACCTGCCG
ATCATCCTGC TGACCAGCCG GGAAGACCGG GACACGAAAA TTCGCGGACT TGAGCAGGGG
GCATCCGATT ACGTCACCAA ACCCTTCGAC TCGGGGGAAC TGGTTGCCCG GGTCCGGGTG
CAGATGAAGG TAAAGGGTCT CCAGGACGAA CTGAAGCGCT CCAACGAGCT GCTGCGCAAA
TTGTCCATCA CCGACCCCCT CACCCACCTG CATAACCGTC GTCACCTGAT GGAAATGGTG
GACAAGGAGT TCCAGCGGGC CTCCCGCAAG GGGGGCGCGC TTTCCCTAGT CATTCTCGAC
ATCGACTATT TCAAGAAAAT CAACGACACC TACGGTCATC AGGAGGGAGA CAAGGTGCTG
GTGGCTCTGG CAGACATCGT CCGCCTGCGG CTTCGCAGCT ACGATGTTGC CGCCCGCTAC
GGGGGCGAAG AGTTCGTCCT GCTGCTGCCG GAAACCCCTC TGCAGGAGGC CCAGGCCATT
GCCGAGCGGC TGCGGCTGGA GGTGCAGGAT CACGTCTTCG ACGGGAGCCT CCACGGACAG
GTCATCACCA TCAGCCTGGG CGTGGCTACC TATCCATCAC CCCGCATCGA GGGGACCGAC
TCCCTCTTCA GGCAGGCCGA CGAGGCCCTC TACCGGGCCA AGCAGAACGG TCGCAACAGG
GTGGAGCTCA TGTCAGGCTC GACATAA
|
|---|
| Protein sequence | MAMTALVIDD SEVLREEIVR TLKEARLFET YLEARDGLEG FKTLLNNKVD LVLCDLEMPR
MDGFRFLSMT RSRGELQDLP IILLTSREDR DTKIRGLEQG ASDYVTKPFD SGELVARVRV
QMKVKGLQDE LKRSNELLRK LSITDPLTHL HNRRHLMEMV DKEFQRASRK GGALSLVILD
IDYFKKINDT YGHQEGDKVL VALADIVRLR LRSYDVAARY GGEEFVLLLP ETPLQEAQAI
AERLRLEVQD HVFDGSLHGQ VITISLGVAT YPSPRIEGTD SLFRQADEAL YRAKQNGRNR
VELMSGST
|
|---|
| |