| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3353 |
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| Symbol | |
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| ID | 2686435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3684041 |
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| End bp | 3684931 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637128047 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | NP_954393 |
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| Protein GI | 39998442 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0622873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTGA CGGCGCGGGT GGGGGCCGAC CAGGCCGGCG TACGGCTCGA CGAGGGGGCG
GCGCGGCTCT TTCCCCAGCT CTCCAAAACC CGGATCCGTA CTATCATCGA CTGGGGAGGA
TGCGCTGTGG GGGGGACCAT GGTGCGGGTG GCGTCCCGCC GTCTTCAGGC TGGTGACGAA
ATCGTCCTCG GGGTAATGGA GCCGGAGCGT TACCGGGAGA TTACCCTGGC ACCCGAAGAT
ATCTTGTTTG AAGACGGCGG CTATCTGGCC GTGAACAAGG CCTCCGGACT CAACTGCCAG
CGGACTCCCT ACCAGCTCAA GGGGACCGTT GAGTATGCCG TGACCCTCCA CTTCCGGGCC
TGTGGCAGCG CCGAGCCCGC ACGAGTGATC CACCGCCTGG ACCGGGGCAC CTCGGGGGTT
ATGATCTTTC CCGCCTCCCG CCGGGCGGCA GCCCATATCT CGCGGGAACT GAAGGAAGGG
AGGGTGGAAA AGGTCTACTG GGCGCTGGTA GCGGGCATGC CGCTGGCCGA TTCCTGGCAG
GTCGACGCAC CCGTGGCCAA GGTGGGTACG TCCCGCTACG GGGTGGCGCC GGTCGGCAAG
GCCGCCTTGA CCGAGTTCCG GGTTGTGGCC CGGGGGAACG GCGCGACTCT GGTGGAAGCC
CGTCCCCGCA CCGGCCGCAC CCACCAGATC CGCGTCCATC TGGCCCATGG GGGGCTTTCG
ATCATCGGCG ATACGACTTA CGGCGGTATC GCCGCGCCGC GGATGATGCT CCACTGTCGA
ACCATGACCT TTCGGGCTGA AGACGGCCGG CCGGTGAGCG CCACGGCCCC CCCTGACCGG
GAGTTTACCG CCGCTTGCGA ACAGCACGGA ATCCAGTTCG GCGGCGCATG A
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| Protein sequence | MILTARVGAD QAGVRLDEGA ARLFPQLSKT RIRTIIDWGG CAVGGTMVRV ASRRLQAGDE
IVLGVMEPER YREITLAPED ILFEDGGYLA VNKASGLNCQ RTPYQLKGTV EYAVTLHFRA
CGSAEPARVI HRLDRGTSGV MIFPASRRAA AHISRELKEG RVEKVYWALV AGMPLADSWQ
VDAPVAKVGT SRYGVAPVGK AALTEFRVVA RGNGATLVEA RPRTGRTHQI RVHLAHGGLS
IIGDTTYGGI AAPRMMLHCR TMTFRAEDGR PVSATAPPDR EFTAACEQHG IQFGGA
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