Gene GSU3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU3239 
SymbolcafA 
ID2688290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp3551672 
End bp3553267 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content59% 
IMG OID637127932 
Productribonuclease G 
Protein accessionNP_954280 
Protein GI39998329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0328342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCCGGA AGCCCTGGCT GAGGCCAGGA TCGAGAAGCT CCAGGTGCTT TTCAAGGAAT 
CGTGATTCAA TTTTTCATAC AGGATACCCA TCAATGGCCA ATGAACTGGT GATCAACACC
TCGTCCCACG AGACCCGCAT CGCTCTCATC GAGAACGGCA CCATTGCCGA GCTCTACATT
GAGCGGAGCC GCGAAAAGGG GATCGTCGGC AACATCTACA AGGGGAGGGT CGTACGCGTC
CTTCCCGGCA TGCAGGCGGC ATTTGTCGAC ATCGGCCTGG AGAAGGCGGC TTTTCTCTAC
GTGGCCGATG TGTTCGATGC CATGGAGGAG TTCGAGACCT TCATGGAGGT GAACGGCGAG
GAGAGCGACA GTGAACGGCA GGTTCTTCAC CCGCTCCACC CCATCGAAGA ACTCCTTCAG
GAAGGGCAGG AAATTCTGGT TCAGGTGTCC AAGGAACCCA TCGGCACCAA GGGGGCCCGT
ATCACCTCTC ATGTGTCGCT GCCTGGCCGC CACCTGGTCT ACATGCCGAC GGTGGACCAC
GTGGGAGTGT CTCGGCGGAT CGAAGATGAG CCGGAGCGCG AGCGGCTTAA GGAAATCGTG
GGCAAGGCGA AGCCGGCCGG GGGCGGGTTC ATCGTTCGGA CCGCCGCCGA GGGCAAGACC
GAGGAGGATC TGGTCGCCGA CATGAACTAC CTGACGAAGC TCTGGGAAGA GGTTGTCAGA
CGCAACGAAA AGGCTCATGC CCCCTGTCTC ATTCATGCCG ACCTGGACGT GACCCAGAAG
GTCATCCGTG ACATCCTCAC CGAAAACGTT TCCCGCATCG TGGTCGACTC CCGGCACGAG
CACGACAAGA TCGTCCAGTT CATCTCCACC TTCATGCCGA AAATGAAGTA CTCCATGGAG
CTCTACGACG ACGAGGAGCC CATCTTTGAT CACTTCGGGC TGGAGGTGGA GATCAGCCGG
GCACTGGGAC GCAAGGTCTG GCTCAAGAGC GGCGGCTATA TCATCATCGA GCAGACCGAG
GCCCTTACCG CCATCGATGT CAACACCGGC CGGTTCGTGG GCAAACACAA CCTGGAGGAC
ACCATCCTCA AGACCAACCT GGAGGCGGTT AAGGAGATCG CCTACCAGCT CAGGCTGCGC
AATATCGGCG GGATCATCAT CATCGACTTC ATCGACATGG AGAAGGAGGT CAACCGGGAG
AAGGTCTTTA CGGCGCTGGA GGAGGCCATG AAGGCCGACA AGTCCAAGAC CAACATCCTG
AAGATCTCGG ATCTGGGCCT GGTGGAGATG ACCCGGAAGC GGGTGCGGGA GTCTATCGGC
AGGATGATGT GCGAGCCCTG CCCCTACTGC GAGGGGAGAG GGTACGTGAA GTCCAAGACA
ACGGTCTGTC ACGAGATATT CCGCGAACTG CGCCGGGAGA TGCTCGATAT TCGCGGCAGC
AAGGTAATGC TCACCGTGCA TCCCCAGGTG GCCGATCTCC TCTACGACGA GGAGCGGCGA
GGGTTGGAGG AGTTGGAGAA GAAGTTCAAG AAGCGGATTA CGGTCCGGGC CAAGCCCGGT
TTTCATCAGG AGCAGTTCGA GATCGCCATC AGCTGA
 
Protein sequence
MRRKPWLRPG SRSSRCFSRN RDSIFHTGYP SMANELVINT SSHETRIALI ENGTIAELYI 
ERSREKGIVG NIYKGRVVRV LPGMQAAFVD IGLEKAAFLY VADVFDAMEE FETFMEVNGE
ESDSERQVLH PLHPIEELLQ EGQEILVQVS KEPIGTKGAR ITSHVSLPGR HLVYMPTVDH
VGVSRRIEDE PERERLKEIV GKAKPAGGGF IVRTAAEGKT EEDLVADMNY LTKLWEEVVR
RNEKAHAPCL IHADLDVTQK VIRDILTENV SRIVVDSRHE HDKIVQFIST FMPKMKYSME
LYDDEEPIFD HFGLEVEISR ALGRKVWLKS GGYIIIEQTE ALTAIDVNTG RFVGKHNLED
TILKTNLEAV KEIAYQLRLR NIGGIIIIDF IDMEKEVNRE KVFTALEEAM KADKSKTNIL
KISDLGLVEM TRKRVRESIG RMMCEPCPYC EGRGYVKSKT TVCHEIFREL RREMLDIRGS
KVMLTVHPQV ADLLYDEERR GLEELEKKFK KRITVRAKPG FHQEQFEIAI S