Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3191 |
Symbol | |
ID | 2688377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3496790 |
End bp | 3498706 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637127884 |
Product | TPR domain-containing protein |
Protein accession | NP_954232 |
Protein GI | 39998281 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAT ACCTTACACT CTTCGTGCTT TCCCTGTCGG CCGCGACCGC GCTGGGGGGG GAGGCAGTTG CCGCCCAGGA GCGGTGCTGG GAGGCGAAGA GGCTTGTCAA ATCACTTTCG GGCGAGGATG AGGACGCCCG GGCGAATACT GAAAAACGAA TCCTCGAATA TTGCTCCGAC GGCGCTGCCG GCCATTTCGT CAAGGGGCTC CGGGCCGAGC GTGAAAAACG CTTCGACCAG GCGGTGACGG AATATCGCGA AACGCTCCGG ATGGACCCTT CGTTTCCCGA TGCCCAAGGA AGTCTCGGCC TGGCCCTGCT GGCCAAGGGT TCCGCCGACG AGGCCGTGGT GGAACTGACC CGCGCCCTGG CCGAAGATTC CAAGCCCCGC TATCATCAGG GCCTCGGCAA AATTTTTGCT GAACGCTCCC TCTATTCCCT AGCCCTTTAT CATTATGCCG AAGCCCTGCG CGAACTCCCC GACGACCCGT CGATTCGTGT GGACCTCGCA CAGGTCTACC GGCAGGCAGG CAAAAAGGAA GAGGCGGAGA AGGAGCTGAA AAAGGCCCTC ACCGTTGCTC CGGCCAATGA AAATGCCCGC CTTGCCCTCG CATCTCTCTA TCTGGCCGAT GGCCGCACCG AAGGCGCGGT CCAGGAACTC AAGCAGGCCC AACTGGCCAA TCCCGGCAAC CGCGGCATCC ACCTCCTCCT TGCAGAAGCA TATGAAAAAC TTGGTGATCG CAAGGCCGCC GAGTACGAAT ACACCCTTTC CGGGCGCCAA CGAGGCGTCC TTCCCGAAGA ATACCTCCGT CGGGGTGACG AACGGATGGC AGCCAAAGAG TTCCCCAAGG CCGTGGAGGA GTACCGTGCT GCCCTGAAAG AGCGTCCCGG GTCCGCGGAG GTGCTGCATA AGCTGTCCGG TGCCCAGGCA GCCGCGGGGC TCGATGACGA TGCCATTGCA TCCTACCGCG AACTGCTGCG AGTAAAGCCC GGCAATGCCG CTAATCATTA CAACCTCGGC ATTATCTACG AGCGCAAGGG GCTCATCGAC GAGGCCGTGG TGGAATACAA ACAGGCGGTT CGACTCTCTG CCGAGCACGG TGACGCCCGG CGCCGACTCG CCGATATCTA CACCCTGCGC GGCAGCCATC CCCAAGCCAT TGAGCAGTAC CGCGAACTCC TCAAGCGGGG CGACAGCAAT CCCGTCCTCC ATCTCAAGCT TGCCCGCGGT TTCATGTCCT CGAAGAACAC CAAGGATGCC ATAGCCTCTT ACAACGAGGC CCTCAAACTG GACCCGGACA ACCTGGAAGC CCATCGGGAA CTCGCTGCCG TCTACCGCAA GTTGAACCAG ATGGACGACG CGTCCAAGCA GTATCGCGAG GTGCTCCGCA TCAAAAAAGA CGATGCCGAG GCCCGCAACA TCCTGACAGC TATTTACGTC AAGGAGAAGA AATACGATGA ACTGGTCCCC CTTCTCCAGG AAGGGGTCGA ATTGGCTCCC AACGATGCCA TGAGCCACTA CAAGCTCGGG CTCATTCATG AATTCCGCAA GGACTACGAT TCAGCCGAGG TGAGCTACCG GAAAGCGACC GAACTCAAGG ATGATCACGC AAAGGCTCTC AACGCCCTGG GGCGCATCTA TCTGAAAACC GGCAAACTTA CCGAGGCCAA GGAGGCCCTG GAAGCGGCCA AAAAGGCCGA CCCTGGCATG GAAGAGACGG CTGTTCTTCT CAGCAACATC AAGGATGAGC TGAGCCCGGA GCCGAAGCGG TACGTGAAGA AGAAAGGGAC CAAAGGGCGC AAGTCCGCCG TTTCCAAGAA GAGGTCCGGC AAGAAAAGCT CCGCCAAGAA GAGTACAACG AAAAAGAAAT CGACGAAAAA GAGTTCGTCG TCCGGAAAGA AAAAAAGCGG CACATAA
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Protein sequence | MKKYLTLFVL SLSAATALGG EAVAAQERCW EAKRLVKSLS GEDEDARANT EKRILEYCSD GAAGHFVKGL RAEREKRFDQ AVTEYRETLR MDPSFPDAQG SLGLALLAKG SADEAVVELT RALAEDSKPR YHQGLGKIFA ERSLYSLALY HYAEALRELP DDPSIRVDLA QVYRQAGKKE EAEKELKKAL TVAPANENAR LALASLYLAD GRTEGAVQEL KQAQLANPGN RGIHLLLAEA YEKLGDRKAA EYEYTLSGRQ RGVLPEEYLR RGDERMAAKE FPKAVEEYRA ALKERPGSAE VLHKLSGAQA AAGLDDDAIA SYRELLRVKP GNAANHYNLG IIYERKGLID EAVVEYKQAV RLSAEHGDAR RRLADIYTLR GSHPQAIEQY RELLKRGDSN PVLHLKLARG FMSSKNTKDA IASYNEALKL DPDNLEAHRE LAAVYRKLNQ MDDASKQYRE VLRIKKDDAE ARNILTAIYV KEKKYDELVP LLQEGVELAP NDAMSHYKLG LIHEFRKDYD SAEVSYRKAT ELKDDHAKAL NALGRIYLKT GKLTEAKEAL EAAKKADPGM EETAVLLSNI KDELSPEPKR YVKKKGTKGR KSAVSKKRSG KKSSAKKSTT KKKSTKKSSS SGKKKSGT
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