| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3071 |
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| Symbol | murD |
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| ID | 2686310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3377285 |
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| End bp | 3378643 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637127764 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | NP_954113 |
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| Protein GI | 39998162 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCA AAGGAAAGAA CATACTCGTT GTGGGCCTCG CCCGGACCGG CGTGGCGGTT
GCCCGTTTCC TCGCGGCGCA GGGCGCCCGG GTGACCGTGA CCGATTTGCG GGACGAGGCC
GCCCTGGCCG GGCCCCTGGA GCAACTGGCC GGCCACCCTG TGAGCTACGT GCTGGGACGT
CACGACGAGG CCGACTTCGC TGCCGCCGAA ACGGTGGTGG TAAGCCCGGG CGTCCCCCAG
GAAAGCCCCT ATCTCCAGGC GGCACGACGG GCCGGACGTG AGGTCATTAC CGAGATCGAG
CTTGCGTCCA GGTTCATCAC TGCGCCTCTG GTGGCCATCA CGGGCACCAA CGGCAAGACG
ACCACCACGA CCCTCACCGG CGAACTCTTC GCGGGATGCG GGTTCCGGAC GTTCGTTGGA
GGAAATATCG GCAACCCGCT CATCGAACTG GTGGAGACCG GGGCGGCAGT GGACCGGGTG
GTGGTGGAGA TCAGCTCCTT CCAGCTCGAA TGGATCCGCT CGTTCCGGCC CACGGTCGCG
GTGCTCCTCA ACATCACCGA AGACCACCTG GACCGGTACG CCACCTATCA GGAGTACATC
GACGCCAAGG CCCGGATTTT CAAGAACCAG ACCGCGTCGG ACTGGGCGGT CCTCAACGTG
GACGATCCGA TCGTGGCAGG TCTGGCCGGC AGGACGTGCG CTGCAGTGTT CCCCATGAGC
CGGCAACGGG AGCTTGGCGA GGGGATATTC TATCGGGACG GGGCCATCAT CTTCCGCCAC
GCCGGTCGCC AGGAGCGGTT TCCCACGGAC CGCTTCAGGA TCACCGGGGT CCACAACATT
GAGAACATCA TGGCGTCCCT TGCCGCCGCG CTGCTTCTGG GATGCGATGC CGACCGGGCG
TTGGCGTGCG TTGAGGCGTT CGGCGGACTC CCCCACCGGA TGGAACTGGT GCGCGAACTC
AACGGTGTCC GGTACTTCGA GGACAGCAAG GCCACCAACG TGGGGAGCGT GGAAAAGGCG
CTGGCTAGCT TCAACGACAT CACCCTCATC GCCGGCGGCA AAGACAAGGG GGGCAGCTAT
GCCCCCCTCG CCGGACTCGT GGCCGAGCGC GTACGGCATA TGATCCTGAT CGGCGAGGCA
AAGGATCGAA TGGCCCGTGA ACTGGGGCAT CTCACGGACA CCCGCATGGC AGTAACCCTG
GAAGATGCCG TGGAACTGGC CGCCTCACTG ACGCAGCCGG GGGGAGTGGT CCTCTTCTCG
CCCGCCTGTT CCAGCTTCGA CATGTTCCGC GATTACGAAG AGCGGGCGCA GCGGTTCCGC
GCCGCCGTTG ATGCGCTGAG TCCGGGAGGC ACGCCGTGA
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| Protein sequence | MDLKGKNILV VGLARTGVAV ARFLAAQGAR VTVTDLRDEA ALAGPLEQLA GHPVSYVLGR
HDEADFAAAE TVVVSPGVPQ ESPYLQAARR AGREVITEIE LASRFITAPL VAITGTNGKT
TTTTLTGELF AGCGFRTFVG GNIGNPLIEL VETGAAVDRV VVEISSFQLE WIRSFRPTVA
VLLNITEDHL DRYATYQEYI DAKARIFKNQ TASDWAVLNV DDPIVAGLAG RTCAAVFPMS
RQRELGEGIF YRDGAIIFRH AGRQERFPTD RFRITGVHNI ENIMASLAAA LLLGCDADRA
LACVEAFGGL PHRMELVREL NGVRYFEDSK ATNVGSVEKA LASFNDITLI AGGKDKGGSY
APLAGLVAER VRHMILIGEA KDRMARELGH LTDTRMAVTL EDAVELAASL TQPGGVVLFS
PACSSFDMFR DYEERAQRFR AAVDALSPGG TP
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