Gene GSU2857 details

Gene Information

• Locus tag: GSU2857
• Symbol: rplC
• ID: 2686777
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3128558
• End bp: 3129190
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637127546
• Product: 50S ribosomal protein L3
• Protein accession: NP_953900
• Protein GI: 39997949
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.918611
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGG GACTTATAGC GAAAAAGCTG GGGATGACCC AGATCTTTGC AGAAGACGGC 
AAGCGCATTC CGGTTACTGT CGTTCAGGCC GGTCCGTGTG TCGTGCTCCA GAAGAAGACC 
AGTGCAACTG ACGGCTATGA TGCTATTCAG GTTGGTTTTC TGTCCCAGGA GGCAAGAAAA 
GTCACCAAGC CTATGCTCGG CCACATCAAG GCGGCCGGCC AAGGCGCATT CGCACACATT 
CGCGAGTTCA GGCTCGATGA TGTCGACCGC TATAATGTTG GCGACGTTAT ATCCGCGGAC 
GCGTTTGAAG TTGGTGAGTA TATCGATGTT ACCGGCACCA GTATCGGTAA GGGCTTTCAA 
GGCGTTATCA AGCGCTGGGG CTTCCGTGGC GGGCGTTCTT CACACGGTTC CTGCTTTCAT 
CGCGCCCCCG GTTCGATCGG CAGCTCAGCC TACCCCTCAC GCGTCTTCAA GAACAAGAAG 
ATGCCCGGCC AGCTCGGTAA TGAAAGGGTG ACCGTGCAGA GACTGCAGGT GGTTCGCGTT 
GATGCCGCCG ACAATATACT GCTCATCAAA GGGGCGATTC CCGGGGCGAA AAATGGAATC 
GTCCTTGTGA AGGATACCGT CAAGCCTCGA TAG 

 

Protein sequence

MKKGLIAKKL GMTQIFAEDG KRIPVTVVQA GPCVVLQKKT SATDGYDAIQ VGFLSQEARK 
VTKPMLGHIK AAGQGAFAHI REFRLDDVDR YNVGDVISAD AFEVGEYIDV TGTSIGKGFQ 
GVIKRWGFRG GRSSHGSCFH RAPGSIGSSA YPSRVFKNKK MPGQLGNERV TVQRLQVVRV 
DAADNILLIK GAIPGAKNGI VLVKDTVKPR