Gene GSU2842 details

Gene Information

• Locus tag: GSU2842
• Symbol: rplF
• ID: 2687150
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3122077
• End bp: 3122616
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637127531
• Product: 50S ribosomal protein L6
• Protein accession: NP_953885
• Protein GI: 39997934
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00681087
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGGA TTGGCAAACG TCCTATTGAA ATACCGAGCG GGGTCAAGGT CGAATTCAGT 
GATTCCGTCC TGACGATCGA AGGGCCCAAG GGAAAACTGT CGCGGCAGGT GATGGATGGA 
GTATCCCTTG AAATCACCCC TTCAAGCATT GAGGTCAAGC GTGCGGATGA CGGCCTGAAA 
GCACGGTCTG CACATGGTCT CACCCGTACA CTCGTGAACA ATATGGTTGT CGGGGTAACG 
AAAGGCTTCG AGCGTGCCCT TGAGATCAAC GGGGTTGGCT ACCGGGCTGA AGCGAAGGGC 
GATGTGCTCA ACCTCAGTCT CGGGTACTCC CACCCGATCA ACTATGCGCT TCCGGCGGGA 
ATCATCGTCG AGGTCGATAA GATGACCAAG CTTGTCGTGA AGGGGATAGA CAAGGAACTC 
GTTGGTCAGA CAGCGGCAAA GATTCGCTCG TTCCGCGGCC CTGAGCCCTA CAAAGGGAAG 
GGGATCAAGT ACGCTGACGA GAAGATTTTG AGAAAAGCCG GCAAAACAGG TAAAAAATAG 

 

Protein sequence

MSRIGKRPIE IPSGVKVEFS DSVLTIEGPK GKLSRQVMDG VSLEITPSSI EVKRADDGLK 
ARSAHGLTRT LVNNMVVGVT KGFERALEIN GVGYRAEAKG DVLNLSLGYS HPINYALPAG 
IIVEVDKMTK LVVKGIDKEL VGQTAAKIRS FRGPEPYKGK GIKYADEKIL RKAGKTGKK