Gene GSU2832 details

Gene Information

• Locus tag: GSU2832
• Symbol: rpsD
• ID: 2686834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3116173
• End bp: 3116799
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637127521
• Product: 30S ribosomal protein S4
• Protein accession: NP_953875
• Protein GI: 39997924
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.80203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTAGAT ATACAGGTCC TTCCTGCCGG CTGTGCAGAA GGGAGAACAT GGAGCTGTTT 
CTGAAGGGTG AGCGGTGCTA TACCGATAAG TGTGCCATTA AGCGGCGTAA TTATCCGCCG 
GGACAGCATG GGCAGGGACG GCCGAAGGTC TCCAACTACG GCGTTCAGCT GCGCGAAAAG 
CAAAAAGTGA GGAGGATCTA CGGCATCCTC GAGAAGCAAT TTCGGAGCTA TTTCCAAGAG 
GCGGATCGTC TCAAGGGAGT TACTGGTGAG AATCTGCTCT CGCTGCTTGA GCGCCGTCTG 
GACAATGTGG TGTACCGGCT TGGTTTTGCC GCTTCCCGCA CCGAGGCCAG AATCCTCGTT 
CGGCATAATC ACTTCACGCT GAACGGCAAG AAGGCGAATA TTCCTTCGAT CCAGCTCCGT 
GCTGGCGATG TCGTTGAACT CAAGGAAAAA AGCCGGAAGA TAGCGTGTAT CAATGAGTCT 
CTTGATGCGG TTGTGCGCAG GGGCATTCCC CAGTGGCTTG AGCTTGAGAA GGACGCTTAC 
AAAGGTGTCG TGAAAACTCT TCCCGTGCGT GAAGACATTA CGATGCCGAT CCAGGAGCAA 
CTGATCGTCG AGCTCTATTC GAAGTAA 

 

Protein sequence

MARYTGPSCR LCRRENMELF LKGERCYTDK CAIKRRNYPP GQHGQGRPKV SNYGVQLREK 
QKVRRIYGIL EKQFRSYFQE ADRLKGVTGE NLLSLLERRL DNVVYRLGFA ASRTEARILV 
RHNHFTLNGK KANIPSIQLR AGDVVELKEK SRKIACINES LDAVVRRGIP QWLELEKDAY 
KGVVKTLPVR EDITMPIQEQ LIVELYSK