| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2719 |
|---|
| Symbol | hoxY |
|---|
| ID | 2687284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2996388 |
|---|
| End bp | 2996975 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637127410 |
|---|
| Product | NAD-reducing hydrogenase, delta subunit |
|---|
| Protein accession | NP_953764 |
|---|
| Protein GI | 39997813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGT CTGGGGGGAT AACACGGGGT GCGCCCGGAG GAATGGAACT GATCGGCAGC
GGCCGGCTCC GGCTTGCCAC GGTCTGGCTG GGAGGCTGCT CGGGGTGCCA CATGAGCTTC
CTCGACCTGG ATGAGTATCT CCTGGAACTG TCCCAGGCGG CCGACCTGGT CTACGGGCCG
TTCGTGGATG CCAAGGAATT CCCGGCGGGC GTGGATGTGG CGTTGGTGGA GGGGGCGGTA
ACCAATCGTG CGAATCTGGC CATGGCCGGT ATCATCCGTC AGCGGAGCCG GACCGTGATC
AGTTTCGGCG ACTGCGCCAT CACCGGTAAC GTTACTGCCA TGCGCAACCT TCTCACCGTT
GCCGAGACCC TGGATCCCTT TCGCTGTGAC GGCGAGGCCT CGCCCGCCTT CGACTATGCG
GCAGTGCCCC AGCTTCTGCC GCGGGCCCTG CCGCTCCACC AGGTGATTCC GGTGGACGGC
TACATTCCCG GCTGTCCGCC TGGCCCGGAC CGGATCCGGG CAGCCATTGA ATGCATGCTG
CGGGGAGAGC CGGTACACCT GGCCCCCGGC ATGCTCACGT TCGGATAG
|
|---|
| Protein sequence | MTPSGGITRG APGGMELIGS GRLRLATVWL GGCSGCHMSF LDLDEYLLEL SQAADLVYGP
FVDAKEFPAG VDVALVEGAV TNRANLAMAG IIRQRSRTVI SFGDCAITGN VTAMRNLLTV
AETLDPFRCD GEASPAFDYA AVPQLLPRAL PLHQVIPVDG YIPGCPPGPD RIRAAIECML
RGEPVHLAPG MLTFG
|
|---|
| |