| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2697 |
|---|
| Symbol | |
|---|
| ID | 2687528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2977070 |
|---|
| End bp | 2978272 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637127387 |
|---|
| Product | multidrug resistance protein |
|---|
| Protein accession | NP_953742 |
|---|
| Protein GI | 39997791 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCCA TGTACAGAAC ACGACTGATG ACCGTAGTGG GACTTCTTGC GGTCGGGATA
ATGATGGTCG GTTGCGGCAA GAAGAACGCT GCAACTCCCC CTGCCAGCGG CCCTCCCGAA
GTGGGGGTGA TCGTTGTCAA GCCTGAGCGC GTTGCCCTGA CCACGGAATT GCCGGGCCGG
ACGTCGCCGC TTCTGATTGC CGAAGTTCGC CCCCAGGTAA GTGGGATCAT CCAGAAGCGC
CTGTTTGTCG AAGGTTCCGA CGTGAAGGCG GGGCAGGTCC TCTACCAGAT TGACCCGGCC
ACGTACCAGG CGGCCTTTGC CAGTGCCAAG GCAGCCCTTG CCCGGGCCGA GGCCAATCTC
ATTCCGGCAC GGCTGAAGGA AGAGCGCTTC CGTGACCTGG TCAAGATCAA AGCCGTGAGC
CAGCAGGACT ATGACGACGC CAATGCCGCC CTCAAACAGG CCGAAGCCGA CGTGGCTTCC
GCCAAGGCTG CGGTGGAGAC GGCCCGGATC AATCTGGCCT ACACGAAGGT GACCGCCCCT
ATCTCCGGCC GCATCGGCCG CTCGGCCATC ACCGACGGGG CACTGGTAAC CGCCAATCAG
GCCACGGCCC TGGCCACCAT CCAACAGCTC AGCCCTATCT ATGTGGATGT CACCCAGTCC
AGCGCCGAGT TGCTGAAGCT GAAGCAGAAT CTGGCCAGCG GCATTATGAA GGACAACGCC
GCGGCCCAGG CCAAGGTCAA GCTCCTGCTG GAAGACGGTA GCCCTTATCC GTTGCCGGGA
ACGCTGAAGT TTTCGGAAGT GACCGTTGAC CAGAGCACCG GCTCAATCAC CCTGCGGGCG
GTTTTCCCCA ACCCGAAGCA GACCCTGCTC CCCGGCATGT TCGTGCGCGC CATCGTGGAG
GAGGGGGTGA GCGACCAGGC GATGTTGGTT CCGCAGCGGG GTGTGACCCG CAATCCCCAA
GGTGAGGCCA TGGTCCTGGT GGTGGGGGCC GAGGAGAAGG TGGAGCCGCG GGTAATCAAG
GTCGTCCGGA CCGTGGGGGA GAACTGGCTG GTGAGCGACG GCCTGAAAGC CGGCGACCGG
GTCATTCTGG AGGGAATCCA GAAGGCACGG CCGGGCACGC AGGTTAAAAC CGTGCCGTTC
GCGGCAAAAC CGGAGGCTGC TGCCCCCGCG GCAGCGAACC AAGCGGCGAG TGCCAAAAAA
TAG
|
|---|
| Protein sequence | MQPMYRTRLM TVVGLLAVGI MMVGCGKKNA ATPPASGPPE VGVIVVKPER VALTTELPGR
TSPLLIAEVR PQVSGIIQKR LFVEGSDVKA GQVLYQIDPA TYQAAFASAK AALARAEANL
IPARLKEERF RDLVKIKAVS QQDYDDANAA LKQAEADVAS AKAAVETARI NLAYTKVTAP
ISGRIGRSAI TDGALVTANQ ATALATIQQL SPIYVDVTQS SAELLKLKQN LASGIMKDNA
AAQAKVKLLL EDGSPYPLPG TLKFSEVTVD QSTGSITLRA VFPNPKQTLL PGMFVRAIVE
EGVSDQAMLV PQRGVTRNPQ GEAMVLVVGA EEKVEPRVIK VVRTVGENWL VSDGLKAGDR
VILEGIQKAR PGTQVKTVPF AAKPEAAAPA AANQAASAKK
|
|---|
| |