Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2602 |
Symbol | huP-1 |
ID | 2686315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2869900 |
End bp | 2870190 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637127292 |
Product | DNA-binding protein HU |
Protein accession | NP_953647 |
Protein GI | 39997696 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0717937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAAA GTGAACTGGT AGAAATGCTG GCGGAGAAAA ACTCGTGGCT CACCCGCAAG GACTCGGAGA TGGTGGTCAA CATCGTATTC GACAGTATCG CCGACGCCCT CAAGAGTGGT GAGAAGGTCG AGATCCGCGG CTTCGGAAGC TTCACCGTCC GTGAGCGCGG CGCCCGCGAG GCCCGCAACC CCAAGAGCGG CGCCATCGTC AAGATCCCCG CCAAGAAGAC CCCGTTCTTC AAGACCGGTA AGGAACTCCG CGAGCGAGTA AACCACGAGA ACGCCGATTA G
|
Protein sequence | MTKSELVEML AEKNSWLTRK DSEMVVNIVF DSIADALKSG EKVEIRGFGS FTVRERGARE ARNPKSGAIV KIPAKKTPFF KTGKELRERV NHENAD
|
| |