| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2575 |
|---|
| Symbol | |
|---|
| ID | 2686358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2836201 |
|---|
| End bp | 2838753 |
|---|
| Gene Length | 2553 bp |
|---|
| Protein Length | 850 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637127265 |
|---|
| Product | sensor histidine kinase/response regulator |
|---|
| Protein accession | NP_953621 |
|---|
| Protein GI | 39997670 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGA AGGCCGCCGC ACCATCCCGC GCCTTCCTGC TGGAGCGCGT CAATTACCTG
GAAGAAGCCA ACCATCGCTA CTTGTCGATC CTCGACATGC TGGCCTCCAG CAGTATGTTC
CACAGTGACC TGGGCCGCGC AAAGGACCCC CAGGAAATCT TCCGGGCCAC CCTGACCCAG
CTCCGTCGGG TCCTCGACTG CCGCATGACC GGCTTTCTCA TCTCGTGCAG CGACGGCAGC
TTCAAACTTG TCTCCTGGGA GCCGGACGAG GGGCATGACG AAATCCAGCG CATCATCGAC
GCCAAGATCG TGGACGGCAC CTTTGCCTGG GCCCTGAACC GGAACCAGGC CATCCTCGTC
CCCCTGGCCG ACGACCGGTC CCTGCTGCTG CACGTGGTCG CCACCCGCTC CCGGATCCGC
GGCATGTTCG CGGGCATTCT CCCCGGCAGC TCCCATTCAC CCGATGCGGC AACCCTCAAC
GCCGTGTCGG TCATCATGCA CACCTGCGCC CACTCTCTGG AGAGCACGGA GCTGTACTCC
ATGGTACGGG ATACCCTGGC CTCGCTGGAG CAGCGGGTGC AGGAGCGGAC CCGCGACCTG
GCCGCGGCCC GGGAACAGGC GGAAAGCGCC AGCCGCGCCA AGAGCGATTT CCTCGCCAAC
ATGAGCCATG AGATCAGGAC CCCCCTGAAC GGCATCATGG GGATGACCGA CCTCCTGCTC
GGCGGCGGGC TGAACCAAAC GCAACAGCAC CAGTACCTCG GTGCGATCAA GGGGTCCGCC
GACTGCCTCA TGGGGGTCAT CGGCGACATC CTCGATTTCT CCAAGATAGA AGCGGGGAAG
GTTGAGTTGG ACCCGGTGCC CTTTTCCCTG CGCACGTTCG TGGGACAGGC GGTGCGCTCC
CTGTCCGCCC GGGCGGCCGA GAAGGGGGTG GAACTCGTCT GCGACCCCCG GGAAGATGTG
ATCGACCCGC TCATCGGCGA TTGCGGGAAA CTGCGCCAGG TTCTGGTGAA CCTGGTGGGC
AACGCCATCA AGTTCTCCGA CGGCGGAGAG GTCGTGGTGG CGGTGGAAAC GGCGGCCGTC
GAGGGGAACG AAGTGCTTCT CCGGTTTTCG GTTTCGGACC AGGGGTGCGG GATCGCGCCG
GAGGCGCTGG ACCGGATTTT CAACGTGTTC GAGCAGGCCG ATTCATCCAC CACCAAGCGT
TTCGGCGGCA CCGGCCTCGG CCTGGCCATT TCCCGCAGGA TCGTTCAACT CATGGGGGGC
GATATCCGGG TCGAGAGCGC CCCGGGGGAG GGGAGCACGT TTTACTTCAC CTGCCGGTTC
CAGCTCCGGC CGCCTGAACC CGACAGCCTC GCGGACCACG GCCTTGCCGG GCGGCCCGTG
CTGGTGGTCG AGGCGCCCAC GAGCAGCCGC AGGGTCCTCG TCTCCTACCT GACCGGCTGG
GGCATGCGGC CCCGGGTGGC GGCCACCGTG GACGATGCCC TGGAGCTTGC CGCCGGCATG
ACGACCGCTG CCGGTGAGCC CCTGATGGCG CTGGTGGACA AGAAGTCCCT GGGTGCCGGC
TGGCAGGAGG CGCTCCAGCG CCTGACCGAA GGCGTCGGCA CGGAGTTGAG GCTGATCCTG
ATGACCGAGG TGGGCGACGT GGTCGAAAAG GAGAGCCGCC TCTGGCCGGA CAAGGCGAGG
TGTCTGCTCA AGCCGCTCGT GCACGGCGAT CTCGGGGAGG CGATCGTTTC GGCTCTGACC
GGGCGGGAAC CGTCCGAAAC ACCCCCCCGG TCGGCGCAGC CCGGCAGCGG CCCCGGCCTC
AGTATCCTGG TGGCCGACGA CGTGGAGGTG AACCGGATGC TGGTCAACGC CATTCTCGGC
CGGATGGGGC ACCGGGTGGC CCAGGCCGCC AACGGCGAGG AGGTCCTGAA GGCCCTTGAG
GACTCCCGCT TCGACCTGGT GCTGATGGAT GTGCAGATGC CGGTTATGGA CGGGTTCGAG
ACCGCCCGTC GAATTCGTGA GCAGGAGCGC GGTTCCGGCC GACGGACCCC CATCCTGGCG
CTGACCGCCT ATGCCGGGCG GCAGGATCGG GAACAGTGTC TGTCCGCCGA CATGGACGGC
TATGTGGCCA AGCCCTTTAC GGCCGAGGAA CTGGTCCGGG CAGTGCACTC CTGCTGCGGG
GTCGATGGCT CGCTCGACGG CGCCGGCGAC GGGCGGGAAA CCGCCCCCGC GGTCGCGGAC
GAGGCGCCGC CGGTTTTCGA CCGGCAGGGA TTGCTGGCCC GGCTCCGGGG CAAGGACGAG
CTGGTTCCGA AGTTCGTGGG GATGTTCCGG GACGGGACGG AAAAGAATCT TGCCAAGCTT
TGGGAGGCAG TGGAGAAACG GGATGTCGCG GGGCTTCGGG TGGGGGCACA CGCCATTGTC
GGCGCCGCCG GCAATATCGG CGCGCAACGC GTGCTCGCCT TGGCCCTGCG CATTGAGGAC
GCCGCCATCA GCGGCCGGCT GGACGAAGCG GTTTCCCTGC TTCAGCCCCT TGCCGCCGAA
TATGACACGT TTGTACGCGA AACGGAGAGA TAG
|
|---|
| Protein sequence | MRQKAAAPSR AFLLERVNYL EEANHRYLSI LDMLASSSMF HSDLGRAKDP QEIFRATLTQ
LRRVLDCRMT GFLISCSDGS FKLVSWEPDE GHDEIQRIID AKIVDGTFAW ALNRNQAILV
PLADDRSLLL HVVATRSRIR GMFAGILPGS SHSPDAATLN AVSVIMHTCA HSLESTELYS
MVRDTLASLE QRVQERTRDL AAAREQAESA SRAKSDFLAN MSHEIRTPLN GIMGMTDLLL
GGGLNQTQQH QYLGAIKGSA DCLMGVIGDI LDFSKIEAGK VELDPVPFSL RTFVGQAVRS
LSARAAEKGV ELVCDPREDV IDPLIGDCGK LRQVLVNLVG NAIKFSDGGE VVVAVETAAV
EGNEVLLRFS VSDQGCGIAP EALDRIFNVF EQADSSTTKR FGGTGLGLAI SRRIVQLMGG
DIRVESAPGE GSTFYFTCRF QLRPPEPDSL ADHGLAGRPV LVVEAPTSSR RVLVSYLTGW
GMRPRVAATV DDALELAAGM TTAAGEPLMA LVDKKSLGAG WQEALQRLTE GVGTELRLIL
MTEVGDVVEK ESRLWPDKAR CLLKPLVHGD LGEAIVSALT GREPSETPPR SAQPGSGPGL
SILVADDVEV NRMLVNAILG RMGHRVAQAA NGEEVLKALE DSRFDLVLMD VQMPVMDGFE
TARRIREQER GSGRRTPILA LTAYAGRQDR EQCLSADMDG YVAKPFTAEE LVRAVHSCCG
VDGSLDGAGD GRETAPAVAD EAPPVFDRQG LLARLRGKDE LVPKFVGMFR DGTEKNLAKL
WEAVEKRDVA GLRVGAHAIV GAAGNIGAQR VLALALRIED AAISGRLDEA VSLLQPLAAE
YDTFVRETER
|
|---|
| |